Detailed Information for Phage Mova |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Avanthi Moodley |
Year Found | 2018 |
Location Found | Durban, South Africa |
Finding Institution | University of Kwazulu-Natal |
Program | Mycobacterial Genetics Course, Durban, South Africa |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 29.775348 S, 30.87772 E Map |
Discovery Notes | The phage that was isolated from soil that was found in Durban , South Africa in my backyard.The phage was discovered 96 hours after enriching the soil sample. |
Naming Notes | The name encompasses my name and surname. The "mo" comes from Moodley and the "va" originates from Avanthi. The plaques also appeared to be in motion (although we know they are not) on the agar plates hence the name "MOVA". |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Mar 26, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1615 |
Genome length (bp) | 57599 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCGATGGCGT |
GC Content | 61.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Kwazulu-Natal |
Annotation Status | In GenBank |
Plaque Notes | The plaque appeared to be clear circular zones that contained "halos" or cloudy margins around them. |
Morphotype | Siphoviridae |
Number of Genes | 106 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
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Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MT684595 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |