| Detailed Information for Phage Ms6 |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis ATCC 607 |
| Found By | José Moniz-Pereira and Isabel Portugal |
| Year Found | 1989 |
| Location Found | Lisboa, Portugal |
| Program | Unavailable |
| From enriched soil sample? | No |
| Isolation Temperature | Not entered |
| GPS Coordinates | 38.749614 N, 9.157364 W Map |
| Discovery Notes | Ms6 was spontaneously induced from a Mycobacterium smegmatis HB5688 culture at the Faculty of Pharmacy of the University of Lisbon. |
| Naming Notes | “Ms” stands for Mycobacterium smegmatis. “6” is the number of the strain that released phage particles to the supernatant. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 1, 2022 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 368 |
| Genome length (bp) | 54246 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CGGAAGGCGC |
| GC Content | 62.1% |
| Sequencing Notes | at position 18773 bp 30% of reads contain a C instead of consensus T
at position 18781 bp 40% of reads contain an A instead of consensus T
at position 18782 bp 40% of reads contain an T instead of consensus G |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | F |
| Subcluster | F1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | Being Annotated (Expected completion by 12/31/2025) |
| Plaque Notes | Clear plaques with a small to medium size, with some degree of heterogeneity in size. |
| Morphotype | Siphoviridae |
| Number of Genes | 108 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Ignore |