| Detailed Information for Phage MulchExplorer |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | David Tuchinsky |
| Year Found | 2014 |
| Location Found | Philadelphia, PA USA |
| Finding Institution | La Salle University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 40.040556 N, 75.155278 W Map |
| Discovery Notes | Sample found in mulch in North Dorms at La Salle University. |
| Naming Notes | Sample was found in mulch at La Salle University (Explorer is the Mascot of the school). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Sep 5, 2024 |
| Sequencing Facility | LaSalle University |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 404 |
| Genome length (bp) | 56497 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 10 bases |
| Overhang Sequence | CCGATGGCAT |
| GC Content | 61.4% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | F |
| Subcluster | F1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | La Salle University |
| Annotation Status | Being Annotated (Expected completion by 3/5/2025) |
| Plaque Notes | My plaques were clear signifying they are lytic. |
| Morphotype | Siphoviridae |
| Number of Genes | 108 |
| Number of tRNAs | 0 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Publication Info |
| Uploaded to GenBank? | No |
| GenBank Accession | None yet |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
12 |
| Pitt Freezer Box Grid# |
E5 |
| Available Files |
| Plaque Picture | Download |
| Restriction Digest Picture | Download |
| EM Picture | Download |
