The Actinobacteriophage Database

Mycobacterium phage Ovechkin

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Detailed Information for Phage Ovechkin
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Sarah Brusko
Year Found	2010
Location Found	Richmond, VA USA
Finding Institution	Virginia Commonwealth University
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	37.552266 N, 77.454375 W Map
Discovery Notes	a fairly dry sample of soil, roots, and mulch taken from a small shrub garden located outside of a church, 4-6 inches below the surface, at approximately 75°F in early September 2010
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jun 25, 2012
Genome length (bp)	58338
Character of genome ends	3' Sticky Overhang
Overhang Length	10 bases
Overhang Sequence	CGGAAGGCGC
GC Content	62.0%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	F
Subcluster	F1
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View Blarby (None) MulchSalad (None) Akhila (F1) Alexphander (F1) AlpineSix (F1) ArcusAngelus (F1) Ardmore (F1) Aubs (F1) Awesomesauce (F1) Batiatus (F1) Beakin (F1) BigPhil (F1) Bipolar (F1) Blexus (F1) BlueCrab (F1) BobaPhett (F1) Bobi (F1) BodEinwohner17 (F1) Boomer (F1) Brocalys (F1) Bubbles123 (F1) Burwell21 (F1) BuzzLyseyear (F1) ByChance (F1) Byougenkin (F1) Cabrinians (F1) CaptainTrips (F1) Cerasum (F1) Che8 (F1) Chevrolet (F1) ChickenDinner (F1) Chuckly (F1) Clifton (F1) Coco12 (F1) Cornucopia (F1) Crumble (F1) DaddyRickover (F1) Daenerys (F1) Dante (F1) DaWorst (F1) DeadP (F1) Deb65 (F1) DillTech15 (F1) DirtMcgirt (F1) DLane (F1) DocMcStuffins (F1) Donkeykong (F1) Doomphist (F1) Dorothy (F1) DosHalletts (F1) DotProduct (F1) Doug (F1) Drago (F1) DRBy19 (F1) Eish (F1) EleanorGeorge (F1) Emma (F1) Empress (F1) Enby (F1) Eradicator (F1) Estave1 (F1) Fancypants (F1) Fastidio (F1) Filuzino (F1) Firehouse51 (F1) Flathead (F1) Florinda (F1) Frankie (F1) FreddyB (F1) Fruitloop (F1) Galactic (F1) Gandalph (F1) Geralt (F1) GigiOuiOui (F1) Girafales (F1) Girr (F1) Gorge (F1) GUmbie (F1) Guppsters (F1) Hades (F1) Hamulus (F1) Harley (F1) Hegedechwinu (F1) Hlubikazi (F1) Ibhubesi (F1) IbOuu (F1) IMpilo (F1) Inventum (F1) IrishSherpFalk (F1) JalFarm20 (F1) James (F1) Jarcob (F1) Jinglebell (F1) Job42 (F1) JoeyJr (F1) Juice456 (F1) Juniper1 (F1) Karhdo (F1) Kenuha5 (F1) Kersh (F1) Kimberlium (F1) KingMidas (F1) Kingsley (F1) Koella (F1) Krakatau (F1) KristaRAM (F1) LastJedi (F1) Latretium (F1) Leozinho (F1) Leperchaun (F1) LilMoolah (F1) LittleShirley (F1) Lizziana (F1) Llama (F1) Llij (F1) Lorde (F1) LunaBlu (F1) Madiba (F1) MadMen (F1) Mahavrat (F1) Mandlovu (F1) Mantra (F1) Maravista (F1) Marker (F1) Martik (F1) Mattes (F1) Melissauren88 (F1) MilanaBonita (F1) MilleniumForce (F1) MinionDave (F1) Minnie (F1) Misha28 (F1) MisterCuddles (F1) Modragons (F1) Moonbeam (F1) Mova (F1) Mozy (F1) Ms6 (F1) MulchExplorer (F1) Mutaforma13 (F1) Nimbo (F1) Nitzel (F1) Nivrat (F1) NormanBulbieJr (F1) Ochi17 (F1) OfUltron (F1) Ogopogo (F1) Oksu (F1) OldBen (F1) OlympiaSaint (F1) Ovechkin (F1) OwlsT2W (F1) Pacc40 (F1) Phalconet (F1) Phanphagia (F1) PHappiness (F1) Phasih (F1) Phatniss (F1) PhesterPhotato (F1) Philus (F1) Piper2020 (F1) Pippy (F1) Plumbus (F1) PMC (F1) Poenanya (F1) Polka14 (F1) Pollywog (F1) PopTart (F1) Priscilla (F1) QuickMath (F1) Quico (F1) Radiance (F1) Ramsey (F1) RedBird (F1) Rialto (F1) Rita (F1) RitaG (F1) Rockne (F1) RockyHorror (F1) Royals2015 (F1) Ruby (F1) Saal (F1) Sabbb (F1) Sandalphon (F1) Sarma624 (F1) Sassafras (F1) SassyB (F1) Scottish (F1) Seabastian (F1) Seagreen (F1) SG4 (F1) Shauna1 (F1) ShiLan (F1) ShowerHandel (F1) ShroomBoi (F1) SimranZ1 (F1) SiSi (F1) Sparkdehlily (F1) Spartacus (F1) Spikelee (F1) Spoonbill (F1) StAnnes (F1) Stap (F1) Starcevich (F1) Strokeseat (F1) SuperGrey (F1) SwagPigglett (F1) Taj (F1) TDanisky (F1) TootsiePop (F1) Tootsieroll (F1) Totinger (F1) Tweety (F1) UncleRicky (F1) Velveteen (F1) Veteran (F1) VRedHorse (F1) Wachhund (F1) Wee (F1) Whatsapiecost (F1) Whouxphf (F1) WillSterrel (F1) XFactor (F1) Yorick (F1) Zerg (F1) Zizzle (F1) Avani (F2) Che9d (F2) Demsculpinboyz (F2) Jabbawokkie (F2) Soul22 (F2) Yoshi (F2) Zapner (F2) Squirty (F3) LunaStella (F4) Renaud18 (F4) TChen (F4) ThetaBob (F4) Cornie (F5) Toron (F6)
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Plaque Notes	Plaques as small as 0.2 mm and as large as 4.0 mm. Some are pinpoints (about 0.6 mm in diameter). Others may be broad, comet/fan tails either beside or overlapping a central, pinpoint clearing (0.2-0.8 mm in diameter). Others may be thin, closed (or only partially closed) halos or rings around a central, pinpoint clearing (0.2-0.8 mm in diameter).
Morphotype	Siphoviridae
Number of Genes	106
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Ovechkin_1 Ovechkin_2 (terminase large subunit) Ovechkin_3 (portal protein) Ovechkin_4 (capsid maturation protease) Ovechkin_5 (scaffolding protein) Ovechkin_6 (major capsid protein) Ovechkin_7 (head-to-tail adaptor) Ovechkin_8 (head-to-tail stopper) Ovechkin_9 Ovechkin_10 (tail terminator) Ovechkin_11 (major tail subunit) Ovechkin_12 (tail assembly chaperone) Ovechkin_13 (tail assembly chaperone) Ovechkin_14 (tape measure protein) Ovechkin_15 (minor tail subunit) Ovechkin_16 (minor tail protein) Ovechkin_17 (minor tail subunit) Ovechkin_18 (minor tail subunit) Ovechkin_19 (D-Ala-D-Ala carboxypeptidase) Ovechkin_20 Ovechkin_21 Ovechkin_22 Ovechkin_23 Ovechkin_24 Ovechkin_25 Ovechkin_26 Ovechkin_27 Ovechkin_28 Ovechkin_29 Ovechkin_30 (lysin A) Ovechkin_31 Ovechkin_32 (lysin B) Ovechkin_33 (holin) Ovechkin_34 Ovechkin_35 Ovechkin_36 (DnaQ-like DNA polymerase III subunit) Ovechkin_37 Ovechkin_38 Ovechkin_39 (immunity repressor) Ovechkin_40 Ovechkin_41 (integrase) Ovechkin_42 Ovechkin_43 Ovechkin_44 (Cro protein) Ovechkin_45 Ovechkin_46 Ovechkin_47 Ovechkin_48 Ovechkin_49 Ovechkin_50 Ovechkin_51 Ovechkin_52 Ovechkin_53 Ovechkin_54 Ovechkin_55 Ovechkin_56 (WhiB) Ovechkin_57 (HTH binding domain protein) Ovechkin_58 (HTH binding domain protein) Ovechkin_59 (WhiB) Ovechkin_60 Ovechkin_61 Ovechkin_62 Ovechkin_63 Ovechkin_64 Ovechkin_65 Ovechkin_66 Ovechkin_67 Ovechkin_68 Ovechkin_69 (DNA methylase) Ovechkin_70 Ovechkin_71 Ovechkin_72 Ovechkin_73 Ovechkin_74 Ovechkin_75 Ovechkin_76 Ovechkin_77 Ovechkin_78 Ovechkin_79 Ovechkin_80 Ovechkin_81 Ovechkin_82 Ovechkin_83 Ovechkin_84 Ovechkin_85 Ovechkin_86 Ovechkin_87 Ovechkin_88 Ovechkin_89 Ovechkin_90 Ovechkin_91 Ovechkin_92 Ovechkin_93 Ovechkin_94 Ovechkin_95 Ovechkin_96 Ovechkin_97 Ovechkin_98 (AlpA-like regulatory protein) Ovechkin_99 Ovechkin_100 Ovechkin_101 Ovechkin_102 Ovechkin_103 (glycosyltransferase) Ovechkin_104 Ovechkin_105 (kinase) Ovechkin_106 (glycosyltransferase)
Submitted Annotation in DNA Master Format	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	KR824843
Refseq Number	None yet
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
SEA Designator	2010VACUovechkinSAB
SEA Lysate Titer	3.7e9
Pitt Freezer Box#	19
Pitt Freezer Box Grid#	78
Available Files
Plaque Picture	Download
EM Picture	Download

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