Detailed Information for Phage Peridot |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Rafael Hernandez |
Year Found | 2023 |
Location Found | Seattle, WA USA |
Finding Institution | Seattle Children's Research Institute |
Program | Unavailable |
From enriched soil sample? | Unknown |
Isolation Temperature | 37°C |
GPS Coordinates | 47.58344 N, 122.31497 W Map |
Discovery Notes | ISolated from home flower bed |
Naming Notes | This batch of phages isolated from the first CGIDR phage hunt are named after gemstones |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jun 4, 2025 |
Shotgun Sequencing Method | Illumina |
Read Type | Paired-end reads |
Read Length | 300 bp |
Approximate Shotgun Coverage | 14101 |
Genome length (bp) | 57157 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCGATGGCAT |
GC Content | 61.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Seattle Children's Research Institute |
Annotation Status | Being Annotated (Expected completion by 12/4/2025) |
Morphotype | Siphoviridae |
Has been Phamerated? | No |
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |