Mycobacterium phage Philus
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Detailed Information for Phage Philus
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDanielle Orlandi
Year Found2014
Location FoundHarrisonburg, VA USA
Finding InstitutionJames Madison University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates38.429 N, 78.861 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 16, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1323
Genome length (bp)59235
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCGGATGGCGC
GC Content61.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterF
SubclusterF1
Cluster Life CycleTemperate
Other Cluster Members

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Blarby (None)

MulchSalad (None)

Akhila (F1)

Alexphander (F1)

AlpineSix (F1)

ArcusAngelus (F1)

Ardmore (F1)

Aubs (F1)

Awesomesauce (F1)

Batiatus (F1)

Beakin (F1)

BigPhil (F1)

Bipolar (F1)

Blexus (F1)

BlueCrab (F1)

BobaPhett (F1)

Bobi (F1)

BodEinwohner17 (F1)

Boomer (F1)

Brocalys (F1)

Bubbles123 (F1)

Burwell21 (F1)

BuzzLyseyear (F1)

ByChance (F1)

Byougenkin (F1)

Cabrinians (F1)

CaptainTrips (F1)

Cerasum (F1)

Che8 (F1)

Chevrolet (F1)

ChickenDinner (F1)

Chuckly (F1)

Clifton (F1)

Coco12 (F1)

Cornucopia (F1)

Crumble (F1)

DaddyRickover (F1)

Daenerys (F1)

Dante (F1)

DaWorst (F1)

DeadP (F1)

Deb65 (F1)

DillTech15 (F1)

DirtMcgirt (F1)

DLane (F1)

DocMcStuffins (F1)

Donkeykong (F1)

Doomphist (F1)

Dorothy (F1)

DosHalletts (F1)

DotProduct (F1)

Doug (F1)

Drago (F1)

DRBy19 (F1)

Eish (F1)

EleanorGeorge (F1)

Emma (F1)

Empress (F1)

Enby (F1)

Eradicator (F1)

Estave1 (F1)

Fancypants (F1)

Fastidio (F1)

Filuzino (F1)

Firehouse51 (F1)

Flathead (F1)

Florinda (F1)

Frankie (F1)

FreddyB (F1)

Fruitloop (F1)

Galactic (F1)

Gandalph (F1)

Geralt (F1)

GigiOuiOui (F1)

Girafales (F1)

Girr (F1)

Gorge (F1)

GUmbie (F1)

Guppsters (F1)

Hades (F1)

Hamulus (F1)

Harley (F1)

Hegedechwinu (F1)

Hlubikazi (F1)

Ibhubesi (F1)

IbOuu (F1)

IMpilo (F1)

Inventum (F1)

IrishSherpFalk (F1)

JalFarm20 (F1)

James (F1)

Jarcob (F1)

Jinglebell (F1)

Job42 (F1)

JoeyJr (F1)

Juice456 (F1)

Juniper1 (F1)

Karhdo (F1)

Kenuha5 (F1)

Kersh (F1)

Kimberlium (F1)

KingMidas (F1)

Kingsley (F1)

Koella (F1)

Krakatau (F1)

KristaRAM (F1)

LastJedi (F1)

Latretium (F1)

Leozinho (F1)

Leperchaun (F1)

LilMoolah (F1)

LittleShirley (F1)

Lizziana (F1)

Llama (F1)

Llij (F1)

Lorde (F1)

LunaBlu (F1)

Madiba (F1)

MadMen (F1)

Mahavrat (F1)

Mandlovu (F1)

Mantra (F1)

Maravista (F1)

Marker (F1)

Martik (F1)

Mattes (F1)

Melissauren88 (F1)

MilanaBonita (F1)

MilleniumForce (F1)

MinionDave (F1)

Minnie (F1)

Misha28 (F1)

MisterCuddles (F1)

Modragons (F1)

Moonbeam (F1)

Mova (F1)

Mozy (F1)

Ms6 (F1)

MulchExplorer (F1)

Mutaforma13 (F1)

Nimbo (F1)

Nitzel (F1)

Nivrat (F1)

NormanBulbieJr (F1)

Ochi17 (F1)

OfUltron (F1)

Ogopogo (F1)

Oksu (F1)

OldBen (F1)

OlympiaSaint (F1)

Ovechkin (F1)

OwlsT2W (F1)

Pacc40 (F1)

Phalconet (F1)

Phanphagia (F1)

PHappiness (F1)

Phasih (F1)

Phatniss (F1)

PhesterPhotato (F1)

Philus (F1)

Piper2020 (F1)

Pippy (F1)

Plumbus (F1)

PMC (F1)

Poenanya (F1)

Polka14 (F1)

Pollywog (F1)

PopTart (F1)

Priscilla (F1)

QuickMath (F1)

Quico (F1)

Radiance (F1)

Ramsey (F1)

RedBird (F1)

Rialto (F1)

Rita (F1)

RitaG (F1)

Rockne (F1)

RockyHorror (F1)

Royals2015 (F1)

Ruby (F1)

Saal (F1)

Sabbb (F1)

Sandalphon (F1)

Sarma624 (F1)

Sassafras (F1)

SassyB (F1)

Scottish (F1)

Seabastian (F1)

Seagreen (F1)

SG4 (F1)

Shauna1 (F1)

ShiLan (F1)

ShowerHandel (F1)

ShroomBoi (F1)

SimranZ1 (F1)

SiSi (F1)

Sparkdehlily (F1)

Spartacus (F1)

Spikelee (F1)

Spoonbill (F1)

StAnnes (F1)

Stap (F1)

Starcevich (F1)

Strokeseat (F1)

SuperGrey (F1)

SwagPigglett (F1)

Taj (F1)

TDanisky (F1)

TootsiePop (F1)

Tootsieroll (F1)

Totinger (F1)

Tweety (F1)

UncleRicky (F1)

Velveteen (F1)

Veteran (F1)

VRedHorse (F1)

Wachhund (F1)

Wee (F1)

Whatsapiecost (F1)

Whouxphf (F1)

WillSterrel (F1)

XFactor (F1)

Yorick (F1)

Zerg (F1)

Zizzle (F1)

Avani (F2)

Che9d (F2)

Demsculpinboyz (F2)

Jabbawokkie (F2)

Soul22 (F2)

Yoshi (F2)

Zapner (F2)

Squirty (F3)

LunaStella (F4)

Renaud18 (F4)

TChen (F4)

ThetaBob (F4)

Cornie (F5)

Toron (F6)

Annotating InstitutionJames Madison University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes108
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Philus_1
(terminase small subunit)

Philus_2
(terminase large subunit)

Philus_3
(portal protein)

Philus_4
(capsid maturation protease)

Philus_5
(scaffolding protein)

Philus_6
(major capsid protein)

Philus_7
(head-to-tail adaptor)

Philus_8
(head-to-tail stopper)

Philus_9
(head-to-tail adaptor)

Philus_10
(tail terminator)

Philus_11
(major tail protein)

Philus_12
(tail assembly chaperone)

Philus_13
(tail assembly chaperone)

Philus_14
(tape measure protein)

Philus_15
(minor tail protein)

Philus_16
(minor tail protein)

Philus_17
(minor tail protein)

Philus_18
(minor tail protein)

Philus_19
(minor tail protein)

Philus_20
(minor tail protein)

Philus_21

Philus_22

Philus_23
(minor tail protein)

Philus_24
(minor tail protein)

Philus_25
(helix-turn-helix DNA binding domain protein)

Philus_26

Philus_27

Philus_28

Philus_29

Philus_30
(lysin A)

Philus_31
(lysin B)

Philus_32
(holin)

Philus_33

Philus_34

Philus_35
(DnaQ-like DNA polymerase III subunit)

Philus_36

Philus_37

Philus_38

Philus_39

Philus_40

Philus_41

Philus_42

Philus_43
(tyrosine integrase)

Philus_44
(RelE-like toxin)

Philus_45
(RelB-like antitoxin)

Philus_46

Philus_47
(immunity repressor)

Philus_48

Philus_49
(helix-turn-helix DNA binding domain protein)

Philus_50
(antirepressor)

Philus_51

Philus_52

Philus_53

Philus_54
(excise)

Philus_55

Philus_56

Philus_57

Philus_58

Philus_59

Philus_60
(WhiB family transcription factor)

Philus_61

Philus_62
(WhiB family transcription factor)

Philus_63
(helix-turn-helix DNA binding protein)

Philus_64

Philus_65

Philus_66

Philus_67

Philus_68
(RecA-like DNA recombinase)

Philus_69
(HNH endonuclease)

Philus_70
(DNA methyltransferase)

Philus_71

Philus_72

Philus_73

Philus_74

Philus_75

Philus_76
(G-I-Y Y-I-G endonuclease)

Philus_77
(RepA-like replication initiator)

Philus_78

Philus_79

Philus_80

Philus_81

Philus_82

Philus_83

Philus_84

Philus_85

Philus_86
(MPME1 protein)

Philus_87

Philus_88

Philus_89

Philus_90

Philus_91

Philus_92

Philus_93
(G-I-Y Y-I-G endonuclease)

Philus_94

Philus_95

Philus_96

Philus_97

Philus_98

Philus_99

Philus_100

Philus_101

Philus_102

Philus_103

Philus_104

Philus_105
(glycosyltransferase)

Philus_106

Philus_107
(glycosyltransferase)

Philus_108
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionPP208935
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 15
Pitt Freezer Box Grid# A8
Available Files
GenBank File for PhameratorDownload