Detailed Information for Phage Rockne |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Thomas Bogen |
Year Found | 2012 |
Location Found | South Euclid, OH USA |
Finding Institution | St. Ignatius High School |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 41.518166 N, 81.527814 W Map |
Discovery Notes | Surface soil from garden. One of four picks from original enriched plate. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 29, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1060 |
Genome length (bp) | 56704 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGAAGGCGC |
GC Content | 61.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Lagos |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 108 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | ON970595 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
116 |
Pitt Freezer Box Grid# |
H7 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |