Detailed Information for Phage SG4 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | S. Glennon |
Year Found | 2005 |
Location Found | Champlin Park, MN USA |
Finding Institution | Champlin Park High School |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 45.1891 N, 93.3996 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 20, 2011 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Sanger |
Approximate Shotgun Coverage | 32 |
Genome length (bp) | 59016 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGACGGCGC |
GC Content | 61.9% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 105 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | JN699012 |
Refseq Number | NC_023699 |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
3 |
Pitt Freezer Box Grid# |
A2 |
Available Files |
Virtual Digest Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |