Detailed Information for Phage Sarma624 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Deepika Sarma |
Year Found | 2012 |
Location Found | Pittsburgh, PA USA |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | No |
Isolation Temperature | Not entered |
GPS Coordinates | 40.444138 N, 79.952145 W Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 4, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1355 |
Genome length (bp) | 54312 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCGATGGCAT |
GC Content | 61.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | SUNY Old Westbury |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 105 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MZ622174 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
8 |
Pitt Freezer Box Grid# |
A7 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |