Detailed Information for Phage Sparkdehlily |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Duplicates of this Phage | PeppermintPat |
Found By | Nicholle Johnson |
Year Found | 2014 |
Location Found | Harrisonburg, VA USA |
Finding Institution | James Madison University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 40°C |
GPS Coordinates | 38.4339778N, 78.863759 W Map |
Discovery Notes | I dug up a sample from outside the bioscience building. |
Naming Notes | Named after my 3 dogs, Sparkely, Delilah, and Lily. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2015 |
Sequencing Facility | James Madison University |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 200 |
Genome length (bp) | 56275 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGAAGGCGC |
GC Content | 61.2% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Makes large clear plaques. |
Morphotype | Siphoviridae |
Number of Genes | 111 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KT895280 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
15 |
Pitt Freezer Box Grid# |
A11 |
Available Files |
Plaque Picture | Download |