Detailed Information for Phage VRedHorse |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Vanessa RedHorse and Derek Ralph |
Year Found | 2018 |
Location Found | Helena, MT USA |
Finding Institution | Montana Technological University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 46.602809 N, 112.03159 W Map |
Discovery Notes | VRH was discovered inside of potting soil used for a Venus Flytrap purchased from an online resource. The soil also contained phage GiGiOuiOu. |
Naming Notes | Full name of phage is VanessaRedHorse. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 19, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 420 |
Genome length (bp) | 54800 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGAAGGCGC |
GC Content | 61.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Montana Technological University |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 105 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OP867027 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
130 |
Pitt Freezer Box Grid# |
D3 |
Available Files |
GenBank File for Phamerator | Download |