Detailed Information for Phage BigPhil |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Phillip Johnson |
Year Found | 2014 |
Location Found | Atlanta, GA USA |
Finding Institution | Morehouse College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 33.748631 N, 84.414569 W Map |
Discovery Notes | Found in soil outside the campus greenhouse. I took an inch-deep sample. |
Naming Notes | My name is Phillip. I have been tall my whole life, so many people call me Big Phil. This is why I've named my phage Bigphil. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 8, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 259 |
Genome length (bp) | 53618 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CCGATGGCAT |
GC Content | 61.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Morehouse College |
Annotation Status | In GenBank |
Plaque Notes | Bigphil is made up of small, round phages. |
Morphotype | Siphoviridae |
Number of Genes | 100 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH051248 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
11 |
Pitt Freezer Box Grid# |
C5 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |