Detailed Information for Phage Doomphist |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Joseph Angstman |
Year Found | 2017 |
Location Found | Bismarck, ND USA |
Finding Institution | University of Mary |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 46.725556 N, 100.758611 W Map |
Discovery Notes | Taken from dampened soil near a small stream. Soil was soft, and almost clay-like. Flora around was abundant and flowing with life. |
Naming Notes | Named it after my Overwatch character Doomfist. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 31, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2871 |
Genome length (bp) | 58666 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CGGACGGCGC |
GC Content | 61.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | F |
Subcluster | F1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Mary |
Annotation Status | In GenBank |
Plaque Notes | Medium sized, well-rounded phages |
Morphotype | Siphoviridae |
Number of Genes | 108 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN428047 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
73 |
Pitt Freezer Box Grid# |
F10 |
Available Files |
GenBank File for Phamerator | Download |