Mycobacterium phage Apocalypse
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Detailed Information for Phage Apocalypse
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByStephen Taylor
Year Found2011
Location FoundSpringville, UT USA
Finding InstitutionBrigham Young University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.169457 N, 111.497400 W Map
Discovery NotesSoil Sample
Damp
Surface Depth
30°C
Found along Hobble Creek on the left fork of Hobble Creek Canyon. Soil came from underneath a stream-side tree.
Collected on August 30th, 2011
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 30, 2014
Sequencing FacilityBYU DNA Sequencing Center
Shotgun Sequencing Method454 Pyrosequencing
Approximate Shotgun Coverage102
Genome length (bp)59947
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Apocalypse_1

Apocalypse_2

Apocalypse_3

Apocalypse_4

Apocalypse_6

Apocalypse_7

Apocalypse_8
(terminase)

Apocalypse_9
(portal protein)

Apocalypse_10
(MuF-like minor capsid protein)

Apocalypse_11

Apocalypse_12
(scaffolding protein)

Apocalypse_13
(major capsid protein)

Apocalypse_14
(head-to-tail adaptor)

Apocalypse_15
(head-to-tail stopper)

Apocalypse_16

Apocalypse_17
(tail terminator)

Apocalypse_18

Apocalypse_19

Apocalypse_20

Apocalypse_21
(tape measure protein)

Apocalypse_22
(minor tail protein)

Apocalypse_23
(minor tail protein)

Apocalypse_24
(minor tail protein)

Apocalypse_25
(minor tail protein)

Apocalypse_26

Apocalypse_27
(minor tail protein)

Apocalypse_28
(minor tail protein)

Apocalypse_29

Apocalypse_30
(lysin A)

Apocalypse_31
(lysin B)

Apocalypse_32
(holin)

Apocalypse_33

Apocalypse_34

Apocalypse_35
(MRE11 double-strand break endo/exonuclease)

Apocalypse_36

Apocalypse_37

Apocalypse_38

Apocalypse_39

Apocalypse_40

Apocalypse_41

Apocalypse_42

Apocalypse_43

Apocalypse_44
(tyrosine integrase)

Apocalypse_45

Apocalypse_46
(immunity repressor)

Apocalypse_47
(helix-turn-helix DNA binding protein)

Apocalypse_48
(excise)

Apocalypse_49

Apocalypse_50

Apocalypse_51

Apocalypse_52
(MerR-like helix-turn-helix DNA binding domain protein)

Apocalypse_53
(WhiB family transcription factor)

Apocalypse_54

Apocalypse_55

Apocalypse_56

Apocalypse_57

Apocalypse_58

Apocalypse_59

Apocalypse_60
(DnaE-like DNA polymerase III)

Apocalypse_61

Apocalypse_62

Apocalypse_63

Apocalypse_64
(Cas4 family endonuclease)

Apocalypse_65

Apocalypse_66

Apocalypse_67

Apocalypse_68

Apocalypse_69
(NrdH-like glutaredoxin)

Apocalypse_70
(HNH endonuclease)

Apocalypse_71
(DNA primase/helicase)

Apocalypse_72

Apocalypse_73
(RusA-like resolvase)

Apocalypse_74

Apocalypse_75

Apocalypse_76

Apocalypse_77

Apocalypse_78

Apocalypse_79
(SprT-like protease)

Apocalypse_80

Apocalypse_81

Apocalypse_82

Apocalypse_83

Apocalypse_84

Apocalypse_85

Apocalypse_86

Apocalypse_87
(RtcB-like RNA ligase)

Apocalypse_88

Apocalypse_89

Apocalypse_90

Apocalypse_91

Apocalypse_92

Apocalypse_93

Apocalypse_94
(HicB-like antitoxin)

Apocalypse_95
(HicA-like toxin)

Apocalypse_96

Apocalypse_97

Apocalypse_98

Apocalypse_99
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF668267
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Designator 2011BRYOapocalyspeSET
Pitt Freezer Box# 21
Pitt Freezer Box Grid# 40
Available Files
GenBank File for PhameratorDownload