Mycobacterium phage TBond007
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Detailed Information for Phage TBond007
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByRosa Medellin and Fatin Ahmed
Year Found2015
Location FoundHouston, TX USA
Finding InstitutionUniversity of Houston-Downtown
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates29.765300 N, 95.359400 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 16, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1227
Genome length (bp)61145
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGATGGCAT
GC Content67.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK3
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

Ageofdapage (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

CheetoDust (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Dartin (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jayhawk (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

Llorens (K1)

Lunahalos (K1)

MarkPhew (K1)

McMater (K1)

Mdavu (K1)

MeaningOfLife (K1)

Megsy (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

Richo (K1)

Rosmarinus (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TaiwanKao (K1)

TingHuaYa (K1)

TiniBug (K1)

Tiri (K1)

Topper (K1)

Torres (K1)

TreyKay (K1)

TruffulaTree (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zabiza (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Strobilo (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pharb (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

TribleTrouble (K3)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Kraw (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

OmniCritical (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

Agent47 (K5)

AlleyCat (K5)

Collard (K5)

Dadosky (K5)

Edugator (K5)

Feyre (K5)

Gengar (K5)

Guillsminger (K5)

Heftyboy (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

Miryou (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

Shadow1 (K6)

SirPhilip (K6)

Sunflower1121 (K6)

Syra333 (K6)

TClif (K6)

Tierra (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Boilgate (K8)

Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes97
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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TBond007_1

TBond007_2

TBond007_3

TBond007_4

TBond007_5

TBond007_6

TBond007_7
(terminase)

TBond007_8
(portal protein)

TBond007_9

TBond007_10

TBond007_11
(scaffolding protein)

TBond007_12
(major capsid protein)

TBond007_13
(head-to-tail adaptor)

TBond007_14

TBond007_15

TBond007_16
(minor capsid protein)

TBond007_17

TBond007_18
(tail assembly chaperone)

TBond007_19
(tail assembly chaperone)

TBond007_20
(tape measure protein)

TBond007_21
(minor tail protein)

TBond007_22
(minor tail protein)

TBond007_23
(minor tail protein)

TBond007_24
(minor tail protein)

TBond007_25
(minor tail protein)

TBond007_26
(minor tail protein)

TBond007_27
(minor tail protein)

TBond007_28

TBond007_29

TBond007_30
(lysin A)

TBond007_31
(lysin B)

TBond007_32
(holin)

TBond007_33

TBond007_34

TBond007_35

TBond007_36

TBond007_37

TBond007_38

TBond007_39

TBond007_40

TBond007_41

TBond007_42
(tyrosine integrase)

TBond007_43

TBond007_44

TBond007_45
(immunity repressor)

TBond007_46

TBond007_47

TBond007_48

TBond007_49

TBond007_50

TBond007_51
(WhiB family transcription factor)

TBond007_52

TBond007_53

TBond007_54

TBond007_55
(DnaQ-like DNA polymerase III subunit)

TBond007_56

TBond007_57

TBond007_58
(Cas4 family exonuclease)

TBond007_59

TBond007_60

TBond007_61

TBond007_62

TBond007_63

TBond007_64
(NrdH-like glutaredoxin)

TBond007_65
(HNH endonuclease)

TBond007_66
(DNA primase/helicase)

TBond007_67
(RusA-like resolvase)

TBond007_68

TBond007_69

TBond007_70
(DNA binding protein)

TBond007_71

TBond007_72

TBond007_73

TBond007_74

TBond007_75
(SprT-like protease)

TBond007_76

TBond007_77

TBond007_78

TBond007_79

TBond007_80

TBond007_81

TBond007_82

TBond007_83

TBond007_84

TBond007_85

TBond007_86

TBond007_87

TBond007_88

TBond007_89

TBond007_90

TBond007_91

TBond007_92

TBond007_93

TBond007_94

TBond007_95

TBond007_96

TBond007_97

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX683428
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 25
Pitt Freezer Box Grid# D8
Available Files
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload