Mycobacterium phage Ageofdapage
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Detailed Information for Phage Ageofdapage
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByVishnu Marella
Year Found2021
Location FoundRichmond, VA United States
Finding InstitutionVirginia Commonwealth University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates37.545273 N, 77.454804 W Map
Discovery NotesAhmed and todd collected the sample
Naming NotesThe name came from a catchphrase used in the class
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 20, 2023
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1284
Genome length (bp)60613
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

Ageofdapage (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

CheetoDust (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Dartin (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jayhawk (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

Llorens (K1)

Lunahalos (K1)

MarkPhew (K1)

McMater (K1)

Mdavu (K1)

MeaningOfLife (K1)

Megsy (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

Richo (K1)

Rosmarinus (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TaiwanKao (K1)

TingHuaYa (K1)

TiniBug (K1)

Tiri (K1)

Topper (K1)

Torres (K1)

TreyKay (K1)

TruffulaTree (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zabiza (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Strobilo (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pharb (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

TribleTrouble (K3)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Kraw (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

OmniCritical (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

Agent47 (K5)

AlleyCat (K5)

Collard (K5)

Dadosky (K5)

Edugator (K5)

Feyre (K5)

Gengar (K5)

Guillsminger (K5)

Heftyboy (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

Miryou (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

Shadow1 (K6)

SirPhilip (K6)

Sunflower1121 (K6)

Syra333 (K6)

TClif (K6)

Tierra (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Boilgate (K8)

Annotating InstitutionVirginia Commonwealth University
Annotation StatusIn GenBank
Plaque Notesit's a clear and round plaque with a diameter of .3cm
MorphotypeSiphoviridae
Number of Genes99
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Ageofdapage_1

Ageofdapage_2

Ageofdapage_3

Ageofdapage_4

Ageofdapage_5 — tRNA
(tRNA-Trp(cca))

Ageofdapage_6

Ageofdapage_7

Ageofdapage_8
(terminase)

Ageofdapage_9
(portal protein)

Ageofdapage_10

Ageofdapage_11

Ageofdapage_12
(scaffolding protein)

Ageofdapage_13
(major capsid protein)

Ageofdapage_14
(head-to-tail adaptor)

Ageofdapage_15
(head-to-tail stopper)

Ageofdapage_16

Ageofdapage_17
(tail terminator)

Ageofdapage_18
(major tail protein)

Ageofdapage_19
(tail assembly chaperone)

Ageofdapage_20
(tail assembly chaperone)

Ageofdapage_21
(tape measure protein)

Ageofdapage_22
(minor tail protein)

Ageofdapage_23
(minor tail protein)

Ageofdapage_24

Ageofdapage_25
(minor tail protein)

Ageofdapage_26

Ageofdapage_27
(minor tail protein)

Ageofdapage_28
(minor tail protein)

Ageofdapage_29

Ageofdapage_30
(lysin A)

Ageofdapage_31
(lysin B)

Ageofdapage_32
(holin)

Ageofdapage_33

Ageofdapage_34

Ageofdapage_35
(MRE11 double-strand break endo/exonuclease)

Ageofdapage_36

Ageofdapage_37
(helix-turn-helix DNA binding domain protein)

Ageofdapage_38

Ageofdapage_39

Ageofdapage_40

Ageofdapage_41
(queuine tRNA-ribosyltransferase)

Ageofdapage_42

Ageofdapage_43
(tyrosine integrase)

Ageofdapage_44

Ageofdapage_45
(immunity repressor)

Ageofdapage_46
(helix-turn-helix DNA binding domain protein)

Ageofdapage_47
(excise)

Ageofdapage_48

Ageofdapage_49

Ageofdapage_50

Ageofdapage_51
(MerR-like helix-turn-helix DNA binding domain protein)

Ageofdapage_52
(WhiB family transcription factor)

Ageofdapage_53

Ageofdapage_54

Ageofdapage_55

Ageofdapage_56

Ageofdapage_57

Ageofdapage_58

Ageofdapage_59

Ageofdapage_60
(DnaE-like DNA polymerase III subunit)

Ageofdapage_61

Ageofdapage_62

Ageofdapage_63

Ageofdapage_64
(Cas4 exonuclease)

Ageofdapage_65

Ageofdapage_66

Ageofdapage_67

Ageofdapage_68

Ageofdapage_69

Ageofdapage_70
(NrdH-like glutaredoxin)

Ageofdapage_71
(HNH endonuclease)

Ageofdapage_72
(DNA primase/helicase)

Ageofdapage_73

Ageofdapage_74
(RusA-like resolvase)

Ageofdapage_75

Ageofdapage_76

Ageofdapage_77

Ageofdapage_78

Ageofdapage_79

Ageofdapage_80

Ageofdapage_81

Ageofdapage_82

Ageofdapage_83

Ageofdapage_84

Ageofdapage_85

Ageofdapage_86

Ageofdapage_87

Ageofdapage_88

Ageofdapage_89
(RtcB-like RNA ligase)

Ageofdapage_90

Ageofdapage_91

Ageofdapage_92

Ageofdapage_93

Ageofdapage_94

Ageofdapage_95
(HicB-like antitoxin)

Ageofdapage_96
(HicA-like toxin)

Ageofdapage_97

Ageofdapage_98

Ageofdapage_99

Ageofdapage_100
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR521076
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 145
Pitt Freezer Box Grid# D12
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
Virtual Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload