Mycobacterium phage CaseJules
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Detailed Information for Phage CaseJules
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKailee Keiser
Year Found2015
Location FoundHolland, MI USA
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.788333 N, 86.101111 W Map
Discovery NotesThe soil sample was taken from Hope College's campus at the edge of a sidewalk outside the dining hall.
Naming NotesThis is an abbreviation of my sister's name who, for some reason, was thrilled to have a phage named after her.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 4, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage6211
Genome length (bp)59905
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionHoward University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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CaseJules_1

CaseJules_2

CaseJules_3

CaseJules_4

CaseJules_6

CaseJules_7

CaseJules_8
(terminase)

CaseJules_9
(portal protein)

CaseJules_10

CaseJules_11

CaseJules_12
(scaffolding protein)

CaseJules_13
(major capsid protein)

CaseJules_14
(head-to-tail adaptor)

CaseJules_15
(head-to-tail stopper)

CaseJules_16

CaseJules_17
(tail terminator)

CaseJules_18
(major tail protein)

CaseJules_19
(tail assembly chaperone)

CaseJules_20
(tail assembly chaperone)

CaseJules_21
(tape measure protein)

CaseJules_22
(minor tail protein)

CaseJules_23
(minor tail protein)

CaseJules_24

CaseJules_25
(minor tail protein)

CaseJules_26

CaseJules_27
(minor tail protein)

CaseJules_28
(minor tail protein)

CaseJules_29

CaseJules_30
(lysin A)

CaseJules_31
(lysin B)

CaseJules_32
(holin)

CaseJules_33

CaseJules_34

CaseJules_35
(MRE11 double-strand break endo/exonuclease)

CaseJules_36

CaseJules_37

CaseJules_38

CaseJules_39

CaseJules_40

CaseJules_41

CaseJules_42
(tyrosine integrase)

CaseJules_43

CaseJules_44
(immunity repressor)

CaseJules_45
(helix-turn-helix DNA binding domain)

CaseJules_46
(excise)

CaseJules_47

CaseJules_48

CaseJules_49

CaseJules_50

CaseJules_51

CaseJules_52
(WhiB family transcription factor)

CaseJules_53

CaseJules_54

CaseJules_55

CaseJules_56

CaseJules_57

CaseJules_58

CaseJules_59
(DnaE-like DNA polymerase III (alpha))

CaseJules_60

CaseJules_61

CaseJules_62

CaseJules_63
(Cas4 family exonuclease)

CaseJules_64

CaseJules_65

CaseJules_66

CaseJules_67

CaseJules_68
(NrdH-like glutaredoxin)

CaseJules_69

CaseJules_70
(HNH endonuclease)

CaseJules_71
(DNA primase/helicase)

CaseJules_72

CaseJules_73
(RusA-like resolvase (endonuclease))

CaseJules_74

CaseJules_75

CaseJules_76

CaseJules_77

CaseJules_78
(SprT-like protease)

CaseJules_79

CaseJules_80

CaseJules_81

CaseJules_82

CaseJules_83
(helix-turn-helix DNA binding protein)

CaseJules_84

CaseJules_85

CaseJules_86

CaseJules_87
(rtcB-like RNA ligase)

CaseJules_88

CaseJules_89

CaseJules_90

CaseJules_91

CaseJules_92

CaseJules_93

CaseJules_94
(antitoxin in toxin/antitoxin system, HicB-like)

CaseJules_95
(toxin in toxin/antitoxin system, HicA-like)

CaseJules_96

CaseJules_97

CaseJules_98

CaseJules_99

CaseJules_100
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOK040784
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.16*10^11
Pitt Freezer Box# 19
Pitt Freezer Box Grid# D5
Available Files
EM PictureDownload
GenBank File for PhameratorDownload