Mycobacterium phage Yuna
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Detailed Information for Phage Yuna
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByTia Ny Riana RABEMANANTSOA
Year Found2018
Location FoundRanomafana, Madagascar
Finding InstitutionUniversity of Pittsburgh
ProgramPhage Hunters Integrating Research and Education
From enriched soil sample?Yes
Isolation Temperature22°C
GPS Coordinates21.253333 S, 47.0 E Map
Discovery NotesIsolation and amplification at 22C (room temperature).
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 16, 2018
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage4014
Genome length (bp)62192
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content67.4%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK6
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Capricorn (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Inky (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Spock (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Yuna_1

Yuna_2

Yuna_3

Yuna_4

Yuna_6

Yuna_7

Yuna_8
(terminase)

Yuna_9
(portal protein)

Yuna_10
(MuF-like minor capsid protein)

Yuna_11

Yuna_12
(scaffolding protein)

Yuna_13
(major capsid protein)

Yuna_14
(head-to-tail adaptor)

Yuna_15
(head-to-tail stopper)

Yuna_16

Yuna_17
(tail terminator)

Yuna_18
(major tail protein)

Yuna_19
(tail assembly chaperone)

Yuna_20
(tail assembly chaperone)

Yuna_21
(tape measure protein)

Yuna_22
(minor tail protein)

Yuna_23

Yuna_24
(minor tail protein)

Yuna_25

Yuna_26
(minor tail protein)

Yuna_27

Yuna_28
(minor tail protein)

Yuna_29

Yuna_30

Yuna_31
(lysin A)

Yuna_32
(lysin B)

Yuna_33
(holin)

Yuna_34

Yuna_35

Yuna_36
(exonuclease)

Yuna_37

Yuna_38
(helix-turn-helix DNA binding domain protein)

Yuna_39

Yuna_40

Yuna_41

Yuna_42

Yuna_43

Yuna_44
(queuine tRNA-ribosyltransferase)

Yuna_45

Yuna_46
(integrase)

Yuna_47

Yuna_48
(membrane protein)

Yuna_49
(immunity repressor)

Yuna_50
(Cro protein)

Yuna_51
(excise)

Yuna_52

Yuna_53

Yuna_54

Yuna_55

Yuna_56
(helix-turn-helix DNA binding domain protein)

Yuna_57
(WhiB family transcription factor)

Yuna_58

Yuna_59

Yuna_60

Yuna_61

Yuna_62
(DnaE-like DNA polymerase III)

Yuna_63

Yuna_64

Yuna_65
(Cas4 family exonuclease)

Yuna_66

Yuna_67

Yuna_68

Yuna_69

Yuna_70

Yuna_71
(NrdH-like glutaredoxin)

Yuna_72
(HNH endonuclease)

Yuna_73
(DNA primase/helicase)

Yuna_74
(RusA-like resolvase)

Yuna_75

Yuna_76
(helix-turn-helix DNA binding domain protein)

Yuna_77

Yuna_78

Yuna_79

Yuna_80
(SprT-like protease)

Yuna_81

Yuna_82
(membrane protein)

Yuna_83

Yuna_84

Yuna_85

Yuna_86

Yuna_87

Yuna_88
(RtcB-like RNA ligase)

Yuna_89

Yuna_90

Yuna_91

Yuna_92

Yuna_93

Yuna_94

Yuna_95

Yuna_96

Yuna_97

Yuna_98

Yuna_99

Yuna_100
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234176
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 8
Pitt Freezer Box Grid# C8
Available Files
Plaque PictureDownload
EM PictureDownload
Final DNAMaster FileDownload
GenBank File for PhameratorDownload