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Mycobacterium phage Durfee
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Detailed Information for Phage Durfee
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJoseph Fifer
Year Found2014
Location FoundHolland, MI USA
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates42.788356 N, 86.091125 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 5, 2020
Sequencing FacilityHope College
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage81
Genome length (bp)59905
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Lysogeny NotesDurfee is a temperate phage that produces stable lysogens.
Other Cluster Members

Click to View

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionHoward University
Annotation StatusIn GenBank
Plaque NotesDurfee was isolated and purified at 32°C. However, Durfee does not is not capable of growing at 42°C.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Durfee_1

Durfee_2

Durfee_3
(ATPase domain protein)

Durfee_4

Durfee_6

Durfee_7

Durfee_8
(terminase large subunit)

Durfee_9
(portal protein)

Durfee_10
(MuF-like minor capsid protein)

Durfee_11

Durfee_12
(scaffolding protein)

Durfee_13
(major capsid protein)

Durfee_14
(head-to-tail adaptor)

Durfee_15
(head-to-tail stopper)

Durfee_16

Durfee_17
(tail terminator)

Durfee_18
(major tail protein)

Durfee_19
(tail assembly chaperone)

Durfee_20
(tail assembly chaperone)

Durfee_21
(tape measure protein)

Durfee_22
(minor tail protein)

Durfee_23
(minor tail protein)

Durfee_24

Durfee_25
(minor tail protein)

Durfee_26

Durfee_27
(minor tail protein)

Durfee_28
(minor tail protein)

Durfee_29

Durfee_30
(lysin A)

Durfee_31
(lysin B)

Durfee_32
(holin)

Durfee_33

Durfee_34

Durfee_35
(exonuclease)

Durfee_36
(helix-turn-helix DNA binding domain protein)

Durfee_37

Durfee_38

Durfee_39

Durfee_40

Durfee_41
(tyrosine integrase)

Durfee_42

Durfee_43
(immunity repressor)

Durfee_44
(helix-turn-helix DNA binding domain protein)

Durfee_45
(excise)

Durfee_46

Durfee_47

Durfee_48

Durfee_49
(helix-turn-helix DNA binding domain protein)

Durfee_50
(WhiB family transcription factor)

Durfee_51

Durfee_52

Durfee_53

Durfee_54

Durfee_55

Durfee_56

Durfee_57
(dnaq-like DNA polymerase iii subunit)

Durfee_58

Durfee_59

Durfee_60

Durfee_61
(exonuclease)

Durfee_62

Durfee_63

Durfee_64

Durfee_65

Durfee_66
(NrdH-like glutaredoxin)

Durfee_67

Durfee_68

Durfee_69
(DNA primase)

Durfee_70

Durfee_71
(RusA-like resolvase)

Durfee_72

Durfee_73

Durfee_74

Durfee_75

Durfee_76
(SprT-like protease)

Durfee_77

Durfee_78

Durfee_79
(helix-turn-helix DNA binding domain protein)

Durfee_80

Durfee_81
(helix-turn-helix DNA binding domain protein)

Durfee_82

Durfee_83

Durfee_84

Durfee_85
(RtcB-like RNA ligase)

Durfee_86

Durfee_87

Durfee_88

Durfee_89

Durfee_90

Durfee_91
(HicB-like antitoxin)

Durfee_92
(HicA-like toxin)

Durfee_93

Durfee_94

Durfee_95

Durfee_96

Durfee_97
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW712734
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.08e10
Pitt Freezer Box# 7
Pitt Freezer Box Grid# E7
Available Files
Plaque PictureDownload
Virtual Digest PictureDownload
GenBank File for PhameratorDownload