Mycobacterium phage QuincyRose
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Detailed Information for Phage QuincyRose
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesQuincy (but misspelled "Qunicy"
Found ByAlexandra Vroom
Year Found2015
Location FoundHolland, MI USA
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature32°C
GPS Coordinates42.78822 N, 86.100227 W Map
Discovery NotesI found this by a manhole near a cafeteria dumpster.
Naming NotesI named it QuincyRose because I was wanted the name to have a Q in it.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 9, 2019
Sequencing FacilityHope College
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage1930
Genome length (bp)59719
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUniversity of Maine, Farmington
Annotation StatusIn GenBank
Plaque NotesThe diameter of my plaque ranges from 2 mm to almost 4 mm, depending on how long it incubates and how high the concentration of plaques is. The longer it grows, the larger the plaque. For example, after incubating 48 hours, the average plaque size of 20 plaques was 3.7 mm. Also, the higher the concentration of plaques, the smaller the diameter.

The plaque is circular and clear.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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QuincyRose_1

QuincyRose_2

QuincyRose_3

QuincyRose_4

QuincyRose_5

QuincyRose_6

QuincyRose_7
(terminase)

QuincyRose_8
(portal protein)

QuincyRose_9
(MuF-like minor capsid protein)

QuincyRose_10

QuincyRose_11
(scaffolding protein)

QuincyRose_12
(major capsid protein)

QuincyRose_13
(head-to-tail adaptor)

QuincyRose_14
(head-to-tail stopper)

QuincyRose_15

QuincyRose_16
(tail terminator)

QuincyRose_17
(major tail protein)

QuincyRose_18
(tail assembly chaperone)

QuincyRose_19
(tail assembly chaperone)

QuincyRose_20
(tape measure protein)

QuincyRose_21
(minor tail protein)

QuincyRose_22
(minor tail protein)

QuincyRose_23

QuincyRose_24
(minor tail protein)

QuincyRose_25

QuincyRose_26
(minor tail protein)

QuincyRose_27
(minor tail protein)

QuincyRose_28

QuincyRose_29
(lysin A)

QuincyRose_30
(lysin B)

QuincyRose_31
(holin)

QuincyRose_32

QuincyRose_33

QuincyRose_34
(MRE11 double-strand break endo/exonuclease)

QuincyRose_35

QuincyRose_36

QuincyRose_37

QuincyRose_38

QuincyRose_39

QuincyRose_40
(tyrosine integrase)

QuincyRose_41

QuincyRose_42
(immunity repressor)

QuincyRose_43
(helix-turn-helix DNA binding domain protein)

QuincyRose_44
(excise)

QuincyRose_45

QuincyRose_46

QuincyRose_47

QuincyRose_48
(MerR-like helix-turn-helix DNA binding domain protein)

QuincyRose_49
(WhiB family transcription factor)

QuincyRose_50

QuincyRose_51

QuincyRose_52

QuincyRose_53

QuincyRose_54

QuincyRose_55

QuincyRose_56
(DnaE-like DNA polymerase III)

QuincyRose_57

QuincyRose_58

QuincyRose_59

QuincyRose_60
(Cas4 family exonuclease)

QuincyRose_61

QuincyRose_62

QuincyRose_63

QuincyRose_64
(NrdH-like glutaredoxin)

QuincyRose_65

QuincyRose_66
(HNH endonuclease)

QuincyRose_67
(DNA primase/helicase)

QuincyRose_68
(RusA-like resolvase)

QuincyRose_69

QuincyRose_70

QuincyRose_71

QuincyRose_72

QuincyRose_73

QuincyRose_74

QuincyRose_75

QuincyRose_76

QuincyRose_77

QuincyRose_78

QuincyRose_79

QuincyRose_80

QuincyRose_81

QuincyRose_82

QuincyRose_83
(RtcB-like RNA ligase)

QuincyRose_84

QuincyRose_85

QuincyRose_86

QuincyRose_87

QuincyRose_88

QuincyRose_89
(HicB-like antitoxin)

QuincyRose_90
(HicA-like toxin)

QuincyRose_91

QuincyRose_92

QuincyRose_93

QuincyRose_94
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMZ648037
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 19
Pitt Freezer Box Grid# E6
Available Files
Plaque PictureDownload
GenBank File for PhameratorDownload