Mycobacterium phage Guanica15
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Detailed Information for Phage Guanica15
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJosé Efraín Berríos-López
Year Found2013
Location FoundGuanica, PR
Finding InstitutionUniversity of Puerto Rico at Cayey
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates17.967033 N, 66.821481 W Map
Discovery NotesApril 14, 2013
2:00pm
Collected in a sunny day.
Soil moisture: 20%
Soil pH: 7.0
Soil temperature:34.9°C
Naming NotesFound in Guanica Dry Forest
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJun 30, 2015
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2208
Genome length (bp)60974
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Capricorn (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Inky (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Spock (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUniversity of Pittsburgh
Annotation StatusIn GenBank
Plaque NotesLytic plaque
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Guanica15_1

Guanica15_2

Guanica15_3
(AAA-ATPase)

Guanica15_4

Guanica15_6

Guanica15_7

Guanica15_8
(terminase)

Guanica15_9
(portal protein)

Guanica15_10
(MuF-like minor capsid protein)

Guanica15_11

Guanica15_12
(scaffolding protein)

Guanica15_13
(major capsid protein)

Guanica15_14
(head-to-tail adaptor)

Guanica15_15
(head-to-tail stopper)

Guanica15_16

Guanica15_17
(tail terminator)

Guanica15_18
(major tail protein)

Guanica15_19
(tail assembly chaperone)

Guanica15_20
(tail assembly chaperone)

Guanica15_21
(tape measure protein)

Guanica15_22
(minor tail protein)

Guanica15_23
(minor tail protein)

Guanica15_24
(minor tail protein)

Guanica15_25
(minor tail protein)

Guanica15_26

Guanica15_27
(minor tail protein)

Guanica15_28
(minor tail protein)

Guanica15_29

Guanica15_30
(lysin A)

Guanica15_31
(lysin B)

Guanica15_32
(holin)

Guanica15_33
(membrane protein)

Guanica15_34

Guanica15_35
(phosphodiesterase)

Guanica15_36

Guanica15_37

Guanica15_38
(helix-turn-helix DNA binding domain protein)

Guanica15_39

Guanica15_40

Guanica15_41

Guanica15_42

Guanica15_43
(membrane protein)

Guanica15_44
(integrase)

Guanica15_45
(membrane protein)

Guanica15_46
(immunity repressor)

Guanica15_47
(helix-turn-helix DNA binding domain protein)

Guanica15_48

Guanica15_49

Guanica15_50
(membrane protein)

Guanica15_51

Guanica15_52
(helix-turn-helix DNA binding domain protein)

Guanica15_53
(WhiB family transcription factor)

Guanica15_54

Guanica15_55

Guanica15_56

Guanica15_57

Guanica15_58

Guanica15_59
(DNA polymerase III subunit)

Guanica15_60

Guanica15_61

Guanica15_62

Guanica15_63

Guanica15_64
(exonuclease)

Guanica15_65

Guanica15_66

Guanica15_67

Guanica15_68

Guanica15_69

Guanica15_70

Guanica15_71
(NrdH-like glutaredoxin)

Guanica15_72
(HNH endonuclease)

Guanica15_73
(DNA primase/helicase)

Guanica15_74

Guanica15_75
(resolvase)

Guanica15_76

Guanica15_77

Guanica15_78

Guanica15_79
(peptidase)

Guanica15_80

Guanica15_81

Guanica15_82
(SprT-like protease)

Guanica15_83

Guanica15_84

Guanica15_85
(helix-turn-helix DNA binding domain protein)

Guanica15_86

Guanica15_87

Guanica15_88

Guanica15_89
(polynucleotide kinase)

Guanica15_90
(RtcB-like RNA ligase)

Guanica15_91

Guanica15_92

Guanica15_93

Guanica15_94

Guanica15_95

Guanica15_96

Guanica15_97

Guanica15_98

Guanica15_99

Guanica15_100

Guanica15_101

Guanica15_102

Guanica15_103
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMN234201
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload