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Mycobacterium phage Inky
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Detailed Information for Phage Inky
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByKeith Miller
Year Found2016
Location FoundLouisville, KY USA
Finding InstitutionSpalding University
ProgramKentucky Biomedical Infrastructure Network Small Genomes Discovery Program
From enriched soil sample?Yes
Isolation Temperature12°C
GPS Coordinates38.0225 N, 85.715556 W Map
Discovery NotesBrooks, KY
30 yards into a wooded area,hill top.
many leaves on the ground
soil sample taken at 5 cm depth
Naming NotesFavorite ghost from PacMan
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedNov 30, 2018
Sequencing FacilityNC State Genomic Sciences Laboratory
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage260
Genome length (bp)59708
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.5%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Atiba (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Capricorn (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

DrHayes (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Inky (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

Slimphazie (K1)

Spock (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Rando14 (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionSpalding University
Annotation StatusQC Complete
Plaque Notesclear plaques, 1.5 mm diameter after 24 hour incubation at 37C
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Inky_1

Inky_2

Inky_3

Inky_4

Inky_6

Inky_7
(terminase, small subunit)

Inky_8
(terminase, large subunit)

Inky_9
(portal protein)

Inky_10
(capsid maturation protease)

Inky_11

Inky_12
(scaffolding protein)

Inky_13
(major capsid protein)

Inky_14
(head-to-tail adaptor)

Inky_15
(head-to-tail stopper)

Inky_16

Inky_17
(tail terminator)

Inky_18
(major tail protein)

Inky_19
(tail assembly chaperone)

Inky_20
(tail assembly chaperone)

Inky_21
(tape measure protein)

Inky_22
(minor tail protein)

Inky_23
(minor tail protein)

Inky_24
(minor tail protein)

Inky_25
(minor tail protein)

Inky_26
(minor tail protein)

Inky_27
(minor tail protein)

Inky_28
(minor tail protein)

Inky_29

Inky_30
(lysin A)

Inky_31
(lysin B)

Inky_32
(holin)

Inky_33

Inky_34

Inky_35
(exonuclease)

Inky_36
(helix-turn-helix DNA binding domain)

Inky_37

Inky_38

Inky_39

Inky_40

Inky_41
(tyrosine integrase)

Inky_42
(membrane protein)

Inky_43
(immunity repressor)

Inky_44
(Cro (control of repressor`s operator))

Inky_45
(excise)

Inky_46

Inky_47
(membrane protein)

Inky_48

Inky_49
(helix-turn-helix DNA binding domain)

Inky_50
(WhiB family transcription factor)

Inky_51

Inky_52

Inky_53

Inky_54

Inky_55

Inky_56

Inky_57
(DnaE-like DNA polymerase III (alpha))

Inky_58

Inky_59

Inky_60

Inky_61
(exonuclease)

Inky_62

Inky_63

Inky_64

Inky_65

Inky_66
(NrdH-like glutaredoxin)

Inky_67
(membrane protein)

Inky_68
(HNH endonuclease)

Inky_69
(DNA primase/helicase)

Inky_70

Inky_71
(RusA-like resolvase (endonuclease))

Inky_72

Inky_73

Inky_74

Inky_75

Inky_76
(SprT-like protease)

Inky_77

Inky_78

Inky_79
(membrane protein)

Inky_80

Inky_81

Inky_82

Inky_83

Inky_84

Inky_85
(rtcB-like RNA ligase)

Inky_86

Inky_87

Inky_88

Inky_89

Inky_90

Inky_91
(antitoxin in toxin/antitoxin system, HicB-like)

Inky_92
(toxin in toxin/antitoxin system, HicA-like)

Inky_93

Inky_94

Inky_95

Inky_96
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 28
Pitt Freezer Box Grid# B9
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload