Mycobacterium phage SamuelLPlaqson
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Detailed Information for Phage SamuelLPlaqson
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByJacob Masters and Sarah Lundgren
Year Found2014
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature25°C
GPS Coordinates47.666997 N, 117.403769 W Map
Discovery NotesFound in a planter box.
Naming NotesNamed after a famous actor of reputable fame.
Growth NotesIsolated at room temperature.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 19, 2014
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage114
Genome length (bp)60526
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPlaques are 2mm, turbid,no halo, and round.
MorphotypeSiphoviridae
Number of Genes97
Number of tRNAs1
Has been Phamerated?Yes
Gene List

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SamuelLPlaqson_1

SamuelLPlaqson_2

SamuelLPlaqson_3

SamuelLPlaqson_4

SamuelLPlaqson_6

SamuelLPlaqson_7

SamuelLPlaqson_8
(terminase)

SamuelLPlaqson_9
(portal protein)

SamuelLPlaqson_10
(MuF-like minor capsid protein)

SamuelLPlaqson_11

SamuelLPlaqson_12
(scaffolding protein)

SamuelLPlaqson_13
(major capsid protein)

SamuelLPlaqson_14
(head-to-tail adaptor)

SamuelLPlaqson_15
(head-to-tail stopper)

SamuelLPlaqson_16

SamuelLPlaqson_17
(tail terminator)

SamuelLPlaqson_18

SamuelLPlaqson_19

SamuelLPlaqson_20

SamuelLPlaqson_21
(tape measure protein)

SamuelLPlaqson_22
(minor tail protein)

SamuelLPlaqson_23
(minor tail protein)

SamuelLPlaqson_24
(minor tail protein)

SamuelLPlaqson_25
(minor tail protein)

SamuelLPlaqson_26

SamuelLPlaqson_27
(minor tail protein)

SamuelLPlaqson_28
(minor tail protein)

SamuelLPlaqson_29

SamuelLPlaqson_30
(lysin A)

SamuelLPlaqson_31
(lysin B)

SamuelLPlaqson_32
(holin)

SamuelLPlaqson_33

SamuelLPlaqson_34

SamuelLPlaqson_35

SamuelLPlaqson_36

SamuelLPlaqson_37

SamuelLPlaqson_38

SamuelLPlaqson_39

SamuelLPlaqson_40
(queuine tRNA-ribosyltransferase)

SamuelLPlaqson_41

SamuelLPlaqson_42
(tyrosine integrase)

SamuelLPlaqson_43

SamuelLPlaqson_44
(immunity repressor)

SamuelLPlaqson_45
(helix-turn-helix DNA binding protein)

SamuelLPlaqson_46
(excise)

SamuelLPlaqson_47

SamuelLPlaqson_48

SamuelLPlaqson_49

SamuelLPlaqson_50
(MerR-like helix-turn-helix DNA binding domain protein)

SamuelLPlaqson_51
(WhiB family transcription factor)

SamuelLPlaqson_52

SamuelLPlaqson_53

SamuelLPlaqson_54

SamuelLPlaqson_55

SamuelLPlaqson_56

SamuelLPlaqson_57

SamuelLPlaqson_58
(DnaE-like DNA polymerase III)

SamuelLPlaqson_59

SamuelLPlaqson_60

SamuelLPlaqson_61

SamuelLPlaqson_62
(Cas4 family endonuclease)

SamuelLPlaqson_63

SamuelLPlaqson_64

SamuelLPlaqson_65

SamuelLPlaqson_66

SamuelLPlaqson_67
(NrdH-like glutaredoxin)

SamuelLPlaqson_68
(HNH endonuclease)

SamuelLPlaqson_69
(DNA primase/helicase)

SamuelLPlaqson_70

SamuelLPlaqson_71
(RusA-like resolvase)

SamuelLPlaqson_72

SamuelLPlaqson_73

SamuelLPlaqson_74

SamuelLPlaqson_75

SamuelLPlaqson_76
(SprT-like protease)

SamuelLPlaqson_77

SamuelLPlaqson_78

SamuelLPlaqson_79

SamuelLPlaqson_80

SamuelLPlaqson_81

SamuelLPlaqson_82

SamuelLPlaqson_83

SamuelLPlaqson_84

SamuelLPlaqson_85
(RtcB-like RNA ligase)

SamuelLPlaqson_86

SamuelLPlaqson_87

SamuelLPlaqson_88

SamuelLPlaqson_89

SamuelLPlaqson_90

SamuelLPlaqson_91

SamuelLPlaqson_92

SamuelLPlaqson_93

SamuelLPlaqson_94

SamuelLPlaqson_95

SamuelLPlaqson_96

SamuelLPlaqson_97

SamuelLPlaqson_98
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionKX657794
Refseq NumberNone yet
Published in PaperAnders et al 2017, Genome Announcements: Genome Sequences of Cluster K Mycobacteriophages DrHayes, Urkel, and SamuelLPlaqson
Archiving Info
Archiving status Archived
Pitt Freezer Box# 17
Pitt Freezer Box Grid# D5
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload