Mycobacterium phage DismalStressor
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Detailed Information for Phage DismalStressor
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByVictoria Guillen
Year Found2015
Location FoundSouth Mills, NC USA
Finding InstitutionCollege of William & Mary
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates36.50356 N, 76.353447 W Map
Discovery NotesCollected by a professor at the Dismal Swamp
Naming NotesDismal came from Dismal Swamp, Stressor came from lab experience
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 8, 2016
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage2336
Genome length (bp)58129
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGCGGCAT
GC Content68.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK2
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionProvidence College
Annotation StatusIn GenBank
Plaque NotesRound
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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DismalStressor_1

DismalStressor_2

DismalStressor_3

DismalStressor_4
(terminase)

DismalStressor_5
(portal protein)

DismalStressor_6
(MuF-like minor capsid protein)

DismalStressor_7

DismalStressor_8
(scaffolding protein)

DismalStressor_9
(major capsid protein)

DismalStressor_10
(head-to-tail adaptor)

DismalStressor_11

DismalStressor_12

DismalStressor_13

DismalStressor_14

DismalStressor_15
(tail assembly chaperone)

DismalStressor_16
(tail assembly chaperone)

DismalStressor_17
(tape measure protein)

DismalStressor_18
(minor tail protein)

DismalStressor_19
(minor tail protein)

DismalStressor_20
(minor tail protein)

DismalStressor_21
(minor tail protein)

DismalStressor_22

DismalStressor_23
(minor tail protein)

DismalStressor_24

DismalStressor_25

DismalStressor_26

DismalStressor_27

DismalStressor_28
(lysin A, protease C39 domain)

DismalStressor_29
(lysin B)

DismalStressor_30
(holin)

DismalStressor_31

DismalStressor_32

DismalStressor_33

DismalStressor_34
(MRE11 double-strand break endo/exonuclease)

DismalStressor_35
(LamD-like)

DismalStressor_36
(LamD-like)

DismalStressor_37

DismalStressor_38

DismalStressor_39

DismalStressor_40

DismalStressor_41

DismalStressor_42
(queuine tRNA-ribosyltransferase)

DismalStressor_43
(tyrosine integrase)

DismalStressor_44

DismalStressor_45

DismalStressor_46
(immunity repressor)

DismalStressor_47
(Cro protein)

DismalStressor_48
(excise)

DismalStressor_49

DismalStressor_50

DismalStressor_51

DismalStressor_52

DismalStressor_53

DismalStressor_54
(WhiB family transcription factor)

DismalStressor_55
(nucleoside deoxyribosyltransferase)

DismalStressor_56

DismalStressor_57

DismalStressor_58

DismalStressor_59

DismalStressor_60
(DnaQ-like DNA polymerase III subunit)

DismalStressor_61
(hydrolase)

DismalStressor_62
(DNA helicase)

DismalStressor_63

DismalStressor_64
(HicA-like toxin)

DismalStressor_65

DismalStressor_66

DismalStressor_67

DismalStressor_68

DismalStressor_69
(NrdH-like glutaredoxin)

DismalStressor_70

DismalStressor_71
(HNH endonuclease)

DismalStressor_72
(DNA primase)

DismalStressor_73

DismalStressor_74
(RusA-like resolvase)

DismalStressor_75

DismalStressor_76

DismalStressor_77
(LamD-like)

DismalStressor_78

DismalStressor_79

DismalStressor_80

DismalStressor_81

DismalStressor_82
(SprT-like protease)

DismalStressor_83
(LamD-like)

DismalStressor_84

DismalStressor_85

DismalStressor_86

DismalStressor_87

DismalStressor_88

DismalStressor_89

DismalStressor_90

DismalStressor_91

DismalStressor_92

DismalStressor_93

DismalStressor_94
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH727545
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 4.4x10^10 PFU/mL
Date of SEA Lysate Titering Nov 5, 2015
Pitt Freezer Box# 19
Pitt Freezer Box Grid# A3
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload