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Mycobacterium phage DarthP
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Detailed Information for Phage DarthP
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMeaghan Boggs and Sierra Span
Year Found2015
Location FoundPensacola, FL USA
Finding InstitutionUniversity of West Florida
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates30.549600 N, 87.217700 W Map
Naming NotesWe both like Star Wars and our phage populations look similar to a starry sky so Darth Phager just fits.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedDec 7, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage3102
Genome length (bp)61594
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content67.2%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK6
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUnknown or unassigned
Annotation StatusIn GenBank
Plaque NotesPlaques had defined edges and were relatively circular in shape.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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DarthP_1

DarthP_2

DarthP_3

DarthP_5

DarthP_6

DarthP_7
(terminase)

DarthP_8
(portal protein)

DarthP_9
(MuF-like minor capsid protein)

DarthP_10

DarthP_11
(scaffolding protein)

DarthP_12
(major capsid protein)

DarthP_13
(head-to-tail adaptor)

DarthP_14
(head-to-tail stopper)

DarthP_15

DarthP_16
(tail terminator)

DarthP_17
(major tail protein)

DarthP_18
(tail assembly chaperone)

DarthP_19
(tail assembly chaperone)

DarthP_20
(tape measure protein)

DarthP_21
(minor tail protein)

DarthP_22
(minor tail protein)

DarthP_23
(minor tail protein)

DarthP_24
(minor tail protein)

DarthP_25
(minor tail protein)

DarthP_26
(minor tail protein)

DarthP_27

DarthP_28

DarthP_29
(lysin A)

DarthP_30
(lysin B)

DarthP_31
(holin)

DarthP_32

DarthP_33

DarthP_34
(MRE11 double-strand break endo/exonuclease)

DarthP_35

DarthP_36

DarthP_37

DarthP_38

DarthP_39
(queuine tRNA-ribosyltransferase)

DarthP_40

DarthP_41
(helix-turn-helix DNA binding protein)

DarthP_42
(DNA binding protein)

DarthP_43

DarthP_44

DarthP_45
(immunity repressor)

DarthP_46
(Cro protein)

DarthP_47
(excise)

DarthP_48

DarthP_49

DarthP_50

DarthP_51

DarthP_52

DarthP_53
(WhiB family transcription factor)

DarthP_54

DarthP_55

DarthP_56

DarthP_57

DarthP_58
(DNA polymerase II exonuclease)

DarthP_59

DarthP_60
(Cas4 family exonuclease)

DarthP_61

DarthP_62

DarthP_63

DarthP_64

DarthP_65

DarthP_66
(NrdH-like glutaredoxin)

DarthP_67
(HNH endonuclease)

DarthP_68
(DNA primase/helicase)

DarthP_69
(RusA-like resolvase)

DarthP_70

DarthP_71

DarthP_72

DarthP_73

DarthP_74

DarthP_75

DarthP_76

DarthP_77

DarthP_78

DarthP_79

DarthP_80

DarthP_81

DarthP_82

DarthP_83
(RtcB-like RNA ligase)

DarthP_84

DarthP_85

DarthP_86

DarthP_87

DarthP_88

DarthP_89

DarthP_90

DarthP_91

DarthP_92

DarthP_93

DarthP_94

DarthP_95
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMF140406
Refseq NumberNone yet
Published in PaperAnders et al. 2017, Genome Announcements: Genome Sequences of Mycobacteriophages Amgine, Amohnition, Bella96, Cain, DarthP, Hammy, Krueger, LastHope, Peanam, PhelpsODU, Phrank, SirPhilip, Slimphazie, and Unicorn
Archiving Info
Archiving status Archived
Pitt Freezer Box# 18
Pitt Freezer Box Grid# B12
Available Files
Final DNAMaster FileDownload
GenBank File for PhameratorDownload