Mycobacterium phage Syra333
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Detailed Information for Phage Syra333
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByNomi McIlmoil and Jake Leinas
Year Found2015
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates47.666944 N, 117.402515 W Map
Discovery NotesSample is dark brown, clumpy, and damp. Possible living things in sample as well.
Naming NotesCame based off of a real name of somebody we both know.
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 7, 2022
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage1133
Genome length (bp)60295
Character of genome ends3' Sticky Overhang
Overhang Length10 bases
Overhang SequenceCTCGGGGCAT
GC Content66.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK6
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

Ageofdapage (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

CheetoDust (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Dartin (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jayhawk (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

Llorens (K1)

Lunahalos (K1)

MarkPhew (K1)

McMater (K1)

Mdavu (K1)

MeaningOfLife (K1)

Megsy (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

Richo (K1)

Rosmarinus (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TaiwanKao (K1)

TingHuaYa (K1)

TiniBug (K1)

Tiri (K1)

Topper (K1)

Torres (K1)

TreyKay (K1)

TruffulaTree (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zabiza (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Strobilo (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pharb (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

TribleTrouble (K3)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Kraw (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

OmniCritical (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

Agent47 (K5)

AlleyCat (K5)

Collard (K5)

Dadosky (K5)

Edugator (K5)

Feyre (K5)

Gengar (K5)

Guillsminger (K5)

Heftyboy (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

Miryou (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

Shadow1 (K6)

SirPhilip (K6)

Sunflower1121 (K6)

Syra333 (K6)

TClif (K6)

Tierra (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Boilgate (K8)

Annotating InstitutionGonzaga University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes99
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Syra333_1

Syra333_2

Syra333_3

Syra333_4

Syra333_5

Syra333_6

Syra333_7
(terminase)

Syra333_8
(portal protein)

Syra333_9
(capsid maturation protease)

Syra333_10

Syra333_11
(scaffolding protein)

Syra333_12
(major capsid protein)

Syra333_13
(head-to-tail adaptor)

Syra333_14
(head-to-tail stopper)

Syra333_15

Syra333_16
(tail terminator)

Syra333_17
(major tail protein)

Syra333_18
(tail assembly chaperone)

Syra333_19
(tail assembly chaperone)

Syra333_20
(tape measure protein)

Syra333_21
(minor tail protein)

Syra333_22
(minor tail protein)

Syra333_23

Syra333_24
(minor tail protein)

Syra333_25

Syra333_26
(minor tail protein)

Syra333_27

Syra333_28
(minor tail protein)

Syra333_29

Syra333_30
(lysin A)

Syra333_31
(lysin B)

Syra333_32
(holin)

Syra333_33

Syra333_34

Syra333_35
(metallophosphatase)

Syra333_36

Syra333_37

Syra333_38
(helix-turn-helix DNA-binding domain protein)

Syra333_39

Syra333_40

Syra333_41

Syra333_42

Syra333_43

Syra333_44

Syra333_45
(tyrosine integrase)

Syra333_46

Syra333_47

Syra333_48
(immunity repressor)

Syra333_49
(Cro protein)

Syra333_50
(excise)

Syra333_51

Syra333_52

Syra333_53

Syra333_54

Syra333_55

Syra333_56
(WhiB family transcription factor)

Syra333_57

Syra333_58

Syra333_59

Syra333_60

Syra333_61

Syra333_62
(DnaQ-like DNA polymerase III subunit)

Syra333_63
(exonuclease)

Syra333_64

Syra333_65

Syra333_66

Syra333_67

Syra333_68

Syra333_69

Syra333_70
(NrdH-like glutaredoxin)

Syra333_71
(HNH endonuclease)

Syra333_72
(DNA primase/helicase)

Syra333_73

Syra333_74
(RusA-like resolvase)

Syra333_75

Syra333_76

Syra333_77

Syra333_78

Syra333_79

Syra333_80

Syra333_81

Syra333_82
(SprT-like protease)

Syra333_83

Syra333_84

Syra333_85

Syra333_86

Syra333_87
(MerR-like helix-turn-helix DNA binding domain protein)

Syra333_88

Syra333_89
(RtcB-like RNA ligase)

Syra333_90

Syra333_91

Syra333_92

Syra333_93

Syra333_94

Syra333_95

Syra333_96

Syra333_97

Syra333_98

Syra333_99
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOR434023
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 2.2 x 10^9
Date of SEA Lysate Titering Nov 12, 2015
Pitt Freezer Box# 30
Pitt Freezer Box Grid# E4
Available Files
EM PictureDownload
GenBank File for PhameratorDownload