Detailed Information for Phage Psycho |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Susana Gutierrez |
Year Found | 2019 |
Location Found | Blacksburg, VA United States |
Finding Institution | Virginia Tech |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 37.2278 N, 80.4243 W Map |
Discovery Notes | The phage was found outside of Williams Hall, on Virginia Tech's campus. The phage was collected by the sidewalk, where foot tracks were present. |
Naming Notes | The phage was named "Psycho" because it was found outside of Williams Hall, which houses the Psychology Department at Virginia Tech. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 9, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 1422 |
Genome length (bp) | 62110 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCAGTGGCAT |
GC Content | 65.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K5 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Virginia Tech |
Annotation Status | In GenBank |
Plaque Notes | The plaques are clear and large in size. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MW435854 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
102 |
Pitt Freezer Box Grid# |
C4 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |