Detailed Information for Phage Tiri |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Former names | Feta |
Found By | Penny Demetriades |
Year Found | 2020 |
Location Found | New York City, NY United States |
Finding Institution | Lehigh University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.774777 N, 73.790046 W Map |
Discovery Notes | Environmental sample taken from top two inches of sediment on the ground. Adopted from Tracy Zhang. |
Naming Notes | Tiri means cheese in Greek! |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Sep 14, 2021 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 142 |
Genome length (bp) | 59449 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGTAGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Lehigh University |
Annotation Status | In GenBank |
Plaque Notes | Plaques around 0.20 cm in diameter, with a thin fuzzy ring surrounding the clear center. |
Morphotype | Siphoviridae |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | ON526984 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
124 |
Pitt Freezer Box Grid# |
H7 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
GenBank File for Phamerator | Download |