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Mycobacterium phage Tiri
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Detailed Information for Phage Tiri
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Former namesFeta
Found ByPenny Demetriades
Year Found2020
Location FoundNew York City, NY United States
Finding InstitutionLehigh University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates40.774777 N, 73.790046 W Map
Discovery NotesEnvironmental sample taken from top two inches of sediment on the ground.
Adopted from Tracy Zhang.
Naming NotesTiri means cheese in Greek!
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedSep 14, 2021
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage142
Genome length (bp)59449
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.6%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

Rosmarinus (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

Topper (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

OmniCritical (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Sunflower1121 (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionLehigh University
Annotation StatusIn GenBank
Plaque NotesPlaques around 0.20 cm in diameter, with a thin fuzzy ring surrounding the clear center.
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Tiri_1

Tiri_2

Tiri_3

Tiri_4

Tiri_6

Tiri_7

Tiri_8
(terminase)

Tiri_9
(portal protein)

Tiri_10

Tiri_11

Tiri_12
(scaffolding protein)

Tiri_13
(major capsid protein)

Tiri_14
(head-to-tail adaptor)

Tiri_15
(head-to-tail stopper)

Tiri_16

Tiri_17
(tail terminator)

Tiri_18
(major tail protein)

Tiri_19
(tail assembly chaperone)

Tiri_20
(tail assembly chaperone)

Tiri_21
(tape measure protein)

Tiri_22
(minor tail protein)

Tiri_23
(minor tail protein)

Tiri_24
(minor tail protein)

Tiri_25
(minor tail protein)

Tiri_26
(minor tail protein)

Tiri_27
(minor tail protein)

Tiri_28
(minor tail protein)

Tiri_29

Tiri_30
(lysin A)

Tiri_31
(lysin B)

Tiri_32
(holin)

Tiri_33

Tiri_34

Tiri_35
(MRE11 double-strand break endo/exonuclease)

Tiri_36

Tiri_37

Tiri_38

Tiri_39

Tiri_40

Tiri_41

Tiri_42
(tyrosine integrase)

Tiri_43

Tiri_44
(immunity repressor)

Tiri_45
(helix-turn-helix DNA binding domain protein)

Tiri_46
(excise)

Tiri_47

Tiri_48

Tiri_49

Tiri_50
(MeR-like helix-turn-helix DNA binding domain protein)

Tiri_51
(WhiB family transcription factor)

Tiri_52

Tiri_53

Tiri_54

Tiri_55

Tiri_56

Tiri_57

Tiri_58
(DnaE-like DNA polymerase III alpha)

Tiri_59

Tiri_60

Tiri_61

Tiri_62
(RecB-like exonuclease/helicase)

Tiri_63

Tiri_64

Tiri_65

Tiri_66

Tiri_67
(NrdH-like glutaredoxin)

Tiri_68
(HNH endonuclease)

Tiri_69
(DNA primase/helicase)

Tiri_70

Tiri_71
(RusA-like resolvase)

Tiri_72

Tiri_73

Tiri_74

Tiri_75

Tiri_76

Tiri_77

Tiri_78

Tiri_79

Tiri_80

Tiri_81

Tiri_82

Tiri_83

Tiri_84

Tiri_85
(RtcB-like RNA ligase)

Tiri_86

Tiri_87

Tiri_88

Tiri_89

Tiri_90

Tiri_91

Tiri_92
(HicB-like antitoxin)

Tiri_93
(HicA-like toxin)

Tiri_94

Tiri_95

Tiri_96

Tiri_97
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionON526984
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 124
Pitt Freezer Box Grid# H7
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
GenBank File for PhameratorDownload