Mycobacterium phage Illumine
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Detailed Information for Phage Illumine
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMolly Bogolin
Year Found2013
Location FoundHolland, MI USA
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates42.788525 N, 86.101067 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedAug 5, 2020
Sequencing FacilityHope College
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage268
Genome length (bp)60620
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUniversidad Autónoma de Nuevo León
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

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Illumine_1

Illumine_2

Illumine_3

Illumine_4

Illumine_6

Illumine_7

Illumine_8
(terminase)

Illumine_9
(portal protein)

Illumine_10
(capsid maturation protease)

Illumine_11

Illumine_12
(scaffolding protein)

Illumine_13
(major capsid protein)

Illumine_14
(head-to-tail adaptor)

Illumine_15
(head-to-tail stopper)

Illumine_16

Illumine_17
(tail terminator)

Illumine_18
(major tail protein)

Illumine_19
(tail assembly chaperone)

Illumine_20
(tail assembly chaperone)

Illumine_21
(tape measure protein)

Illumine_22
(minor tail protein)

Illumine_23
(minor tail protein)

Illumine_24
(minor tail protein)

Illumine_25
(minor tail protein)

Illumine_26
(minor tail protein)

Illumine_27
(minor tail protein)

Illumine_28
(minor tail protein)

Illumine_29

Illumine_30
(lysin A)

Illumine_31
(lysin B)

Illumine_32
(holin)

Illumine_33

Illumine_34

Illumine_35
(MRE 11 double-strand break endo/exonuclease)

Illumine_36

Illumine_37
(helix-turn-helix DNA binding domain)

Illumine_38

Illumine_39

Illumine_40
(WXG100 protein)

Illumine_41
(WXG100 domain and membrane protein)

Illumine_42

Illumine_43

Illumine_44
(tyrosine integrase)

Illumine_45

Illumine_46
(immunity repressor)

Illumine_47
(Cro (control of repressor's operator))

Illumine_48
(excise)

Illumine_49

Illumine_50

Illumine_51

Illumine_52
(helix-turn-helix DNA binding domain, MerR-like)

Illumine_53
(WhiB family transcription factor)

Illumine_54

Illumine_55

Illumine_56

Illumine_57

Illumine_58

Illumine_59

Illumine_60
(DnaE-like DNA polymerase III (alpha))

Illumine_61

Illumine_62

Illumine_63

Illumine_64

Illumine_65

Illumine_66
(Cas4 family exonuclease)

Illumine_67

Illumine_68

Illumine_69

Illumine_70

Illumine_71

Illumine_72
(NrdH-like glutaredoxin)

Illumine_73
(HNH endonuclease)

Illumine_74
(DNA primase/polymerase/helicase)

Illumine_75

Illumine_76
(RusA-like resolvase (endonuclease))

Illumine_77

Illumine_78

Illumine_79
(helix-turn-helix DNA binding domain)

Illumine_80

Illumine_81

Illumine_82

Illumine_83

Illumine_84

Illumine_85

Illumine_86

Illumine_87

Illumine_88

Illumine_89
(rtcB-like RNA ligase)

Illumine_90

Illumine_91

Illumine_92

Illumine_93
(helix-turn-helix DNA binding domain)

Illumine_94

Illumine_95
(antitoxin in toxin/antitoxin system, HicB-like)

Illumine_96
(toxin in toxin/antitoxin system, HicA-like)

Illumine_97

Illumine_98

Illumine_99

Illumine_100
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOK040782
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 1.6x10^10
Pitt Freezer Box# 5
Pitt Freezer Box Grid# A10
Available Files
GenBank File for PhameratorDownload