Mycobacterium phage Scarlett
Know something about this phage that we don't? Modify its data.
Detailed Information for Phage Scarlett
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByCoad, Gordon
Year Found2014
Location FoundSpokane, WA USA
Finding InstitutionGonzaga University
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation TemperatureNot entered
GPS Coordinates47.667062 N, 117.403006 W Map
Discovery NotesDiscovered in soil in front of Hughes Hall on Gonzaga University campus
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedFeb 4, 2015
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage222
Genome length (bp)62306
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content68.7%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

Click to View

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

Ageofdapage (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

CheetoDust (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Dartin (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jayhawk (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

Llorens (K1)

Lunahalos (K1)

MarkPhew (K1)

McMater (K1)

Mdavu (K1)

MeaningOfLife (K1)

Megsy (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

Richo (K1)

Rosmarinus (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TaiwanKao (K1)

TingHuaYa (K1)

TiniBug (K1)

Tiri (K1)

Topper (K1)

Torres (K1)

TreyKay (K1)

TruffulaTree (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zabiza (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Strobilo (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pharb (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

TribleTrouble (K3)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Kraw (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

OmniCritical (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

Agent47 (K5)

AlleyCat (K5)

Collard (K5)

Dadosky (K5)

Edugator (K5)

Feyre (K5)

Gengar (K5)

Guillsminger (K5)

Heftyboy (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

Miryou (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

Shadow1 (K6)

SirPhilip (K6)

Sunflower1121 (K6)

Syra333 (K6)

TClif (K6)

Tierra (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Boilgate (K8)

Annotating InstitutionGonzaga University
Annotation StatusIn GenBank
Plaque NotesRound, cloudy, ~2mm plaques
MorphotypeSiphoviridae
Number of Genes102
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

Click to View

Scarlett_1

Scarlett_2

Scarlett_3

Scarlett_4 — tRNA

Scarlett_5

Scarlett_6

Scarlett_7
(terminase)

Scarlett_8
(portal protein)

Scarlett_9
(MuF-like minor capsid protein)

Scarlett_10

Scarlett_11
(scaffolding protein)

Scarlett_12
(major capsid protein)

Scarlett_13
(head-to-tail adaptor)

Scarlett_14
(head-to-tail stopper)

Scarlett_15

Scarlett_16
(tail terminator)

Scarlett_17

Scarlett_18

Scarlett_19

Scarlett_20
(tape measure protein)

Scarlett_21
(minor tail protein)

Scarlett_22
(minor tail protein)

Scarlett_23
(minor tail protein)

Scarlett_24
(minor tail protein)

Scarlett_25
(minor tail protein)

Scarlett_26
(minor tail protein)

Scarlett_27
(minor tail protein)

Scarlett_28

Scarlett_29
(lysin A)

Scarlett_30
(lysin B)

Scarlett_31
(holin)

Scarlett_32

Scarlett_33

Scarlett_34

Scarlett_35
(MRE11 double-strand break endo/exonuclease)

Scarlett_36

Scarlett_37

Scarlett_38

Scarlett_39

Scarlett_40

Scarlett_41

Scarlett_42

Scarlett_43

Scarlett_44
(queuine tRNA-ribosyltransferase)

Scarlett_45
(tyrosine integrase)

Scarlett_46

Scarlett_47
(immunity repressor)

Scarlett_48
(helix-turn-helix DNA binding protein)

Scarlett_49
(excise)

Scarlett_50

Scarlett_51

Scarlett_52

Scarlett_53

Scarlett_54
(MerR-like helix-turn-helix DNA binding domain protein)

Scarlett_55
(WhiB family transcription factor)

Scarlett_56

Scarlett_57

Scarlett_58

Scarlett_59

Scarlett_60

Scarlett_61
(DnaE-like DNA polymerase III)

Scarlett_62

Scarlett_63

Scarlett_64

Scarlett_65
(Cas4 family endonuclease)

Scarlett_66

Scarlett_67

Scarlett_68

Scarlett_69

Scarlett_70

Scarlett_71
(NrdH-like glutaredoxin)

Scarlett_72
(HNH endonuclease)

Scarlett_73
(DNA primase/helicase)

Scarlett_74
(RusA-like resolvase)

Scarlett_75

Scarlett_76

Scarlett_77

Scarlett_78

Scarlett_79
(SprT-like protease)

Scarlett_80

Scarlett_81

Scarlett_82

Scarlett_83

Scarlett_84

Scarlett_85

Scarlett_86
(RtcB-like RNA ligase)

Scarlett_87

Scarlett_88

Scarlett_89

Scarlett_90

Scarlett_91

Scarlett_92

Scarlett_93

Scarlett_94

Scarlett_95
(HicB-like antitoxin)

Scarlett_96
(HicA-like toxin)

Scarlett_97
(hydrolase)

Scarlett_98

Scarlett_99

Scarlett_100

Scarlett_101

Scarlett_102

Scarlett_103
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMH910042
Refseq NumberNone yet
Archiving Info
Archiving status Archived
SEA Lysate Titer 5.2*10^9 pfu/mL
Date of SEA Lysate Titering Oct 30, 2014
Pitt Freezer Box# 17
Pitt Freezer Box Grid# D7
Available Files
EM PictureDownload
GenBank File for PhameratorDownload