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Mycobacterium phage Fefferhead
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Detailed Information for Phage Fefferhead
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMatthew L Petrovich
Year Found2014
Location FoundCary, NC USA
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Unknown
Isolation TemperatureNot entered
GPS Coordinates35.8399 N, 78.8172 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 6, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina Sequencing
Approximate Shotgun Coverage58
Genome length (bp)61366
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content67.0%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK6
Cluster Life CycleTemperate
Other Cluster Members

Click to View

ActinUp (K1)

Adephagia (K1)

Adonis (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

Chris (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

MarkPhew (K1)

Mdavu (K1)

MeaningOfLife (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

Tiri (K1)

TreyKay (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

Boilgate (K4)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

AlleyCat (K5)

Collard (K5)

Edugator (K5)

Gengar (K5)

Guillsminger (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

PhelpsODU (K6)

Phrank (K6)

SirPhilip (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Annotating InstitutionUniversity of Southern California
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Has been Phamerated?Yes
Gene List

Click to View

Fefferhead_1

Fefferhead_2

Fefferhead_3

Fefferhead_5

Fefferhead_6

Fefferhead_7
(terminase)

Fefferhead_8
(portal protein)

Fefferhead_9
(MuF-like minor capsid protein)

Fefferhead_10

Fefferhead_11
(scaffolding protein)

Fefferhead_12
(major capsid protein)

Fefferhead_13
(head-to-tail adaptor)

Fefferhead_14
(head-to-tail stopper)

Fefferhead_15

Fefferhead_16
(tail terminator)

Fefferhead_17
(major tail protein)

Fefferhead_18
(tail assembly chaperone)

Fefferhead_19
(tail assembly chaperone)

Fefferhead_20
(tape measure protein)

Fefferhead_21
(minor tail protein)

Fefferhead_22
(minor tail protein)

Fefferhead_23

Fefferhead_24

Fefferhead_25

Fefferhead_26
(minor tail protein)

Fefferhead_27

Fefferhead_28

Fefferhead_29
(lysin A)

Fefferhead_30
(lysin B)

Fefferhead_31
(holin)

Fefferhead_32

Fefferhead_33

Fefferhead_34
(MRE11 double-strand break endo/exonuclease)

Fefferhead_35

Fefferhead_36

Fefferhead_37

Fefferhead_38
(queuine tRNA-ribosyltransferase)

Fefferhead_39

Fefferhead_40
(tyrosine integrase)

Fefferhead_42

Fefferhead_43
(immunity repressor)

Fefferhead_44
(Cro protein)

Fefferhead_45
(excise)

Fefferhead_46

Fefferhead_47

Fefferhead_48

Fefferhead_49

Fefferhead_50

Fefferhead_51
(WhiB family transcription factor)

Fefferhead_52

Fefferhead_53

Fefferhead_54

Fefferhead_55

Fefferhead_56
(DnaQ-like DNA polymerase III subunit)

Fefferhead_57

Fefferhead_58
(Cas4 family exonuclease)

Fefferhead_59

Fefferhead_60

Fefferhead_61

Fefferhead_62

Fefferhead_63

Fefferhead_64
(NrdH-like glutaredoxin)

Fefferhead_65
(HNH endonuclease)

Fefferhead_66

Fefferhead_67
(DNA primase/helicase)

Fefferhead_68

Fefferhead_69
(RusA-like resolvase)

Fefferhead_70

Fefferhead_71

Fefferhead_72

Fefferhead_73

Fefferhead_74

Fefferhead_75

Fefferhead_76

Fefferhead_77

Fefferhead_78

Fefferhead_79

Fefferhead_80

Fefferhead_81

Fefferhead_82

Fefferhead_83

Fefferhead_84

Fefferhead_85

Fefferhead_86
(RtcB-like RNA ligase)

Fefferhead_87

Fefferhead_88

Fefferhead_89

Fefferhead_90

Fefferhead_91

Fefferhead_92

Fefferhead_93

Fefferhead_94

Fefferhead_95

Fefferhead_96

Fefferhead_97

Fefferhead_98
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionMW601222
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 7
Pitt Freezer Box Grid# E10
Available Files
Plaque PictureDownload
Restriction Digest PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload