Detailed Information for Phage CaseJules |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Kailee Keiser |
Year Found | 2015 |
Location Found | Holland, MI USA |
Finding Institution | Hope College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 32°C |
GPS Coordinates | 42.788333 N, 86.101111 W Map |
Discovery Notes | The soil sample was taken from Hope College's campus at the edge of a sidewalk outside the dining hall. |
Naming Notes | This is an abbreviation of my sister's name who, for some reason, was thrilled to have a phage named after her. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | May 4, 2020 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 6211 |
Genome length (bp) | 59905 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGTAGGCAT |
GC Content | 66.6% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Howard University |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 99 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OK040784 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.16*10^11 |
Pitt Freezer Box# |
19 |
Pitt Freezer Box Grid# |
D5 |
Available Files |
EM Picture | Download |
GenBank File for Phamerator | Download |