Mycobacterium phage Devera
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Detailed Information for Phage Devera
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByDerrick Obiri - Yeboah
Year Found2015
Location FoundHolland, MI USA
Finding InstitutionHope College
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature32°C
GPS Coordinates42.786944 N, 86.101944 W Map
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedMay 4, 2020
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Approximate Shotgun Coverage82
Genome length (bp)60618
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGTAGGCAT
GC Content66.3%
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

Ageofdapage (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

Capricorn (K1)

CaseJules (K1)

CheetoDust (K1)

Chris (K1)

Clipper (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Dartin (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jayhawk (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

Llorens (K1)

Lunahalos (K1)

MacKat (K1)

MarkPhew (K1)

McMater (K1)

Mdavu (K1)

MeaningOfLife (K1)

Megsy (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

Richo (K1)

Rosmarinus (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TaiwanKao (K1)

TingHuaYa (K1)

TiniBug (K1)

Tiri (K1)

Topper (K1)

Torres (K1)

TreyKay (K1)

TruffulaTree (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zabiza (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Strobilo (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

MacnCheese (K3)

Pharb (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

TribleTrouble (K3)

Chancellor (K4)

Cheetobro (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Kraw (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

OmniCritical (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

Agent47 (K5)

AlleyCat (K5)

Collard (K5)

Dadosky (K5)

Edugator (K5)

Feyre (K5)

Gengar (K5)

Guillsminger (K5)

Heftyboy (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

Miryou (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

November (K6)

PhelpsODU (K6)

Phrank (K6)

Shadow1 (K6)

SirPhilip (K6)

Sunflower1121 (K6)

Syra333 (K6)

TClif (K6)

Tierra (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Boilgate (K8)

Annotating InstitutionHoward University
Annotation StatusIn GenBank
MorphotypeSiphoviridae
Number of Genes102
Number of tRNAs1
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Devera_1

Devera_2

Devera_3

Devera_4

Devera_5 — tRNA
(tRNA-Trp(cca))

Devera_6

Devera_7

Devera_8
(terminase)

Devera_9
(portal protein)

Devera_10
(MuF-like minor capsid protein)

Devera_11

Devera_12
(scaffolding protein)

Devera_13
(major capsid protein)

Devera_14
(head-to-tail adaptor)

Devera_15
(head-to-tail stopper)

Devera_16

Devera_17
(tail terminator)

Devera_18
(major tail protein)

Devera_19
(tail assembly chaperone)

Devera_20
(tail assembly chaperone)

Devera_21
(tape measure protein)

Devera_22
(minor tail protein)

Devera_23
(minor tail protein)

Devera_24

Devera_25
(minor tail protein)

Devera_26

Devera_27
(minor tail protein)

Devera_28
(minor tail protein)

Devera_29

Devera_30
(lysin A)

Devera_31
(lysin B)

Devera_32
(holin)

Devera_33

Devera_34

Devera_35
(MRE11 double-strand break endo/exonuclease)

Devera_36

Devera_37

Devera_38

Devera_39

Devera_40

Devera_41
(WXG100 protein)

Devera_42
(WXG100 domain and membrane protein)

Devera_43

Devera_44

Devera_45
(tyrosine integrase)

Devera_46

Devera_47
(immunity repressor)

Devera_48
(Cro protein)

Devera_49
(excise)

Devera_50

Devera_51

Devera_52

Devera_53

Devera_54

Devera_55
(WhiB family transcription factor)

Devera_56

Devera_57

Devera_58

Devera_59

Devera_60

Devera_61

Devera_62
(DnaE-like DNA polymerase III alpha)

Devera_63

Devera_64

Devera_65

Devera_66

Devera_67

Devera_68
(Cas4 family exonuclease)

Devera_69

Devera_70

Devera_71

Devera_72

Devera_73

Devera_74
(NrdH-like glutaredoxin)

Devera_75
(HNH endonuclease)

Devera_76
(DNA primase)

Devera_77

Devera_78
(RusA-like resolvase)

Devera_79

Devera_80

Devera_81
(helix-turn-helix DNA binding domain protein)

Devera_82

Devera_83

Devera_84

Devera_85

Devera_86
(helix-turn-helix DNA binding domain protein)

Devera_87

Devera_88

Devera_89

Devera_90

Devera_91
(RtcB-like RNA ligase)

Devera_92
(AAA-ATPase)

Devera_93

Devera_94

Devera_95

Devera_96

Devera_97
(HicB-like antitoxin)

Devera_98
(HicA-like toxin)

Devera_99

Devera_100

Devera_101

Devera_102

Devera_103
(HNH endonuclease)

Submitted Annotation in DNA Master FormatDownload
Submitted Minimal DNA Master FileDownload
Author ListDownload
Annotation Cover SheetDownload
Publication Info
Uploaded to GenBank?Yes
GenBank AccessionOK040778
Refseq NumberNone yet
Archiving Info
Archiving status Archived
Pitt Freezer Box# 19
Pitt Freezer Box Grid# D7
Available Files
Plaque PictureDownload
EM PictureDownload
GenBank File for PhameratorDownload