Detailed Information for Phage DismalStressor |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Victoria Guillen |
Year Found | 2015 |
Location Found | South Mills, NC USA |
Finding Institution | College of William & Mary |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 36.50356 N, 76.353447 W Map |
Discovery Notes | Collected by a professor at the Dismal Swamp |
Naming Notes | Dismal came from Dismal Swamp, Stressor came from lab experience |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 8, 2016 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2336 |
Genome length (bp) | 58129 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CTCGCGGCAT |
GC Content | 68.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K2 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | Providence College |
Annotation Status | In GenBank |
Plaque Notes | Round |
Morphotype | Siphoviridae |
Number of Genes | 94 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH727545 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
4.4x10^10 PFU/mL |
Date of SEA Lysate Titering |
Nov 5, 2015 |
Pitt Freezer Box# |
19 |
Pitt Freezer Box Grid# |
A3 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |