Detailed Information for Phage Eponine |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Brielle Paul |
Year Found | 2018 |
Location Found | Bethlehem, PA USA |
Finding Institution | Lehigh University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | Not entered |
GPS Coordinates | 40.0 N, 75.0 W Map |
Discovery Notes | -Collected outside Richards House at Lehigh University.
-Soil was a little dry, with some evidence of organic matter. Soil was dark brown in color.
-Soil was collected approx. a couple of inches below the surface.
-Date collected: January 21, 2018 |
Naming Notes | Eponine is the name of my favorite character in the Broadway musical, Les Miserables. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 23, 2019 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1150 |
Genome length (bp) | 58678 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGCGGCCAT |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K4 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Lehigh University |
Annotation Status | In GenBank |
Plaque Notes | -Small clear plaques, about 1-2 mm in diameter. |
Morphotype | Siphoviridae |
Number of Genes | 96 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN945904 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.0X10^10 |
Pitt Freezer Box# |
84 |
Pitt Freezer Box Grid# |
F1 |
Available Files |
Plaque Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |