| Detailed Information for Phage Ganymede |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Abagail Jeavons |
| Year Found | 2014 |
| Location Found | Holland, MI USA |
| Finding Institution | Hope College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 32°C |
| GPS Coordinates | 42.787808 N, 86.100969 W Map |
| Discovery Notes | Ganymede was found in moist top soil covered with mulch, between a sidewalk and a boiler room. |
| Naming Notes | Named for the cup-bearer of the Greek gods |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Aug 8, 2019 |
| Sequencing Facility | Hope College |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 183 |
| Genome length (bp) | 59719 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CTCGTAGGCAT |
| GC Content | 66.5% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | K |
| Subcluster | K1 |
| Cluster Life Cycle | Temperate |
| Lysogeny Notes | Ganymede appears to be a temperate phage. It produces moderately turbid plaques and produced mesas within plaques at high concentrations of its HTL. This leads, in addition to its temperature sensitive growth, leads to the possibility of it being a K1 phage. |
| Other Cluster Members |
|
| Annotating Institution | University of Southern California |
| Annotation Status | In GenBank |
| Morphotype | Siphoviridae |
| Number of Genes | 94 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | ON081331 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| SEA Lysate Titer |
5.2e10 |
| Pitt Freezer Box# |
7 |
| Pitt Freezer Box Grid# |
F3 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
