| Detailed Information for Phage Jayhawk |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | C. Liebengood, A. Morales, G. Ogutu, K. Boles |
| Year Found | 2021 |
| Location Found | Longview, TX United States of America |
| Finding Institution | LeTourneau University |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | 34°C |
| GPS Coordinates | 32.4673 N, 94.7287 W Map |
| Discovery Notes | Our phage was found in a garden bed near a large building of which the area was partly shaded by a nearby tree. The bed was covered richly with mulch. |
| Naming Notes | Our name comes from our favorite college's mascot (Kansas Jayhawks). |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Apr 13, 2023 |
| Sequencing Facility | Pittsburgh Bacteriophage Institute |
| Shotgun Sequencing Method | Illumina |
| Approximate Shotgun Coverage | 21 |
| Genome length (bp) | 59732 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CTCGTAGGCAT |
| GC Content | 66.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | K |
| Subcluster | K1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Ibadan |
| Annotation Status | In GenBank |
| Plaque Notes | We had two different plaque morphologies, one large and one small. The average diameters for the large plaques were 0.4 cm, and the average diameters for the small plaques were 0.2 cm. |
| Morphotype | Siphoviridae |
| Number of Genes | 99 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | PQ184809 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
134 |
| Pitt Freezer Box Grid# |
D4 |
| Available Files |
| Plaque Picture | Download |
| GenBank File for Phamerator | Download |
