Detailed Information for Phage Keshu |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Navisha Dookie |
Year Found | 2009 |
Location Found | Durban, South Africa |
Finding Institution | University of Kwazulu-Natal |
Program | Mycobacterial Genetics Course, Durban, South Africa |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 30.945264 E, 29.817169 S Map |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Oct 2, 2013 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Ion Torrent Sequencing |
Approximate Shotgun Coverage | 728 |
Sanger Finishing Reactions | 8 |
Genome length (bp) | 61251 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGATGGCAT |
GC Content | 67.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K3 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Unknown or unassigned |
Annotation Status | In GenBank |
Plaque Notes | Medium small, circular, and turbid plaques. |
Morphotype | Siphoviridae |
Number of Genes | 101 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | KP027199 |
Refseq Number | NC_026603 |
Published in Paper | Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
131 |
Pitt Freezer Box Grid# |
F12 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |