The Actinobacteriophage Database

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Detailed Information for Phage Kratio
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Found By	Natalia Maldonado-Vazquez
Year Found	2011
Location Found	Arroyo, PR USA
Finding Institution	University of Puerto Rico at Cayey
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	17.991195 N, 66.053436 W Map
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 10, 2012
Sequencing Facility	David H. Murdock Research Institute
Shotgun Sequencing Method	454 Pyrosequencing
Genome length (bp)	62738
Character of genome ends	3' Sticky Overhang
Overhang Length	11 bases
Overhang Sequence	CTCAGTGGCAT
GC Content	65.7%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	K
Subcluster	K5
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View ActinUp (K1) Adephagia (K1) Adonis (K1) Ageofdapage (K1) AlishaPH (K1) Amelie (K1) Anaya (K1) Angelica (K1) Apocalypse (K1) Asayake (K1) Atiba (K1) BaghaKamala (K1) BarrelRoll (K1) BEEST (K1) Beezoo (K1) Bella96 (K1) Belladonna (K1) BGlluviae (K1) Biglebops (K1) Blizzard (K1) Boiiii (K1) Capricorn (K1) CaseJules (K1) CheetoDust (K1) Chris (K1) CREW (K1) CrimD (K1) Curiosium (K1) Dalmuri (K1) Dartin (K1) Deby (K1) Devera (K1) Dole (K1) DrHayes (K1) Durfee (K1) Efra2 (K1) Emerson (K1) Enkosi (K1) Ganymede (K1) Geraldini (K1) Guanica15 (K1) HedwigODU (K1) Homura (K1) Hyperbowlee (K1) Illumine (K1) Inky (K1) Jarvi (K1) JAWS (K1) Jayhawk (K1) Jeckyll (K1) Joy99 (K1) KiSi (K1) LastHope (K1) LaterM (K1) LeMond (K1) LilPharaoh (K1) LindNT (K1) Llorens (K1) Lunahalos (K1) MarkPhew (K1) McMater (K1) Mdavu (K1) MeaningOfLife (K1) Megsy (K1) Murucutumbu (K1) Mynx (K1) Nibb (K1) Nikao (K1) Niklas (K1) Nutello (K1) Oscar (K1) Padfoot (K1) Padpat (K1) Peanam (K1) Peel (K1) Piatt (K1) Pokerus (K1) Prithvi (K1) QuincyRose (K1) Ramen (K1) Rapunzel97 (K1) Richo (K1) Rosmarinus (K1) SamuelLPlaqson (K1) Scarlett (K1) SgtBeansprout (K1) Shaobing (K1) ShiaSurprise (K1) Slimphazie (K1) Spock (K1) Stinson (K1) Sulley (K1) Tachez (K1) TaiwanKao (K1) TingHuaYa (K1) TiniBug (K1) Tiri (K1) Topper (K1) Torres (K1) TreyKay (K1) TruffulaTree (K1) Twitch (K1) Urkel (K1) Validus (K1) Veliki (K1) YoureAdopted (K1) Yunkel11 (K1) Zabiza (K1) Zavala (K1) BoostSeason (K2) DismalFunk (K2) DismalStressor (K2) Findley (K2) Marcoliusprime (K2) Milly (K2) Mufasa (K2) Strobilo (K2) TM4 (K2) ZoeJ (K2) Hurricane (K3) Keshu (K3) MacnCheese (K3) Pharb (K3) Pixie (K3) ShedlockHolmes (K3) TBond007 (K3) TribleTrouble (K3) Chancellor (K4) Cheetobro (K4) Eponine (K4) Fionnbharth (K4) JF1 (K4) Juliette (K4) Malthus (K4) MissDaisy (K4) Mitti (K4) OmniCritical (K4) Patt (K4) Reptar3000 (K4) Ruthiejr (K4) SamScheppers (K4) Slarp (K4) Taquito (K4) Wintermute (K4) Agent47 (K5) AlleyCat (K5) Collard (K5) Dadosky (K5) Edugator (K5) Feyre (K5) Gengar (K5) Guillsminger (K5) Heftyboy (K5) InvictusManeo (K5) Kratio (K5) Larva (K5) Leston (K5) Miryou (K5) OkiRoe (K5) Omnicron (K5) Paola (K5) Psycho (K5) Rando14 (K5) SoSeph (K5) Thyatira (K5) Waterfoul (K5) Amgine (K6) Amohnition (K6) Bryler (K6) Cain (K6) DarthP (K6) Ekdilam (K6) Ellie (K6) Fefferhead (K6) Hammy (K6) Krueger (K6) Marshawn (K6) PhelpsODU (K6) Phrank (K6) Shadow1 (K6) SirPhilip (K6) Sunflower1121 (K6) Syra333 (K6) TClif (K6) Tierra (K6) Unicorn (K6) Ximenita (K6) Yuna (K6) Aminay (K7) Boilgate (K8)
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Plaque Notes	Clear,
Morphotype	Siphoviridae
Number of Genes	99
Number of tRNAs	1
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Kratio_1 Kratio_2 Kratio_3 — tRNA (tRNA-Trp (cca)) Kratio_4 Kratio_5 (terminase) Kratio_6 (portal protein) Kratio_7 (MuF-like minor capsid protein) Kratio_8 Kratio_9 (scaffolding protein) Kratio_10 (major capsid protein) Kratio_11 (head-to-tail adaptor) Kratio_12 (head-to-tail stopper) Kratio_13 Kratio_14 (tail terminator) Kratio_15 (major tail protein) Kratio_16 (tail assembly chaperone) Kratio_17 (tail assembly chaperone) Kratio_18 (tape measure protein) Kratio_19 (minor tail protein) Kratio_20 (minor tail protein) Kratio_21 Kratio_22 (minor tail protein) Kratio_23 Kratio_24 (minor tail protein) Kratio_25 Kratio_26 Kratio_27 Kratio_28 (lysin A) Kratio_29 (lysin B) Kratio_30 (holin) Kratio_31 Kratio_32 Kratio_33 Kratio_34 Kratio_35 Kratio_36 Kratio_37 (serine integrase) Kratio_38 Kratio_39 Kratio_40 Kratio_41 Kratio_42 Kratio_43 Kratio_44 Kratio_45 Kratio_46 Kratio_47 Kratio_48 Kratio_49 Kratio_50 Kratio_51 Kratio_52 Kratio_53 Kratio_54 Kratio_55 Kratio_56 Kratio_57 Kratio_58 (NrdH-like glutaredoxin) Kratio_59 Kratio_60 Kratio_61 Kratio_62 (DNA helicase) Kratio_63 (holliday junction resolvase) Kratio_64 Kratio_65 Kratio_66 Kratio_67 Kratio_68 Kratio_69 Kratio_70 Kratio_71 Kratio_72 Kratio_73 Kratio_74 Kratio_75 Kratio_76 Kratio_77 Kratio_78 Kratio_79 Kratio_80 Kratio_81 Kratio_82 Kratio_83 Kratio_84 Kratio_85 Kratio_86 Kratio_87 (queuine tRNA-ribosyltransferase) Kratio_88 Kratio_89 Kratio_90 Kratio_91 Kratio_92 Kratio_93 Kratio_94 Kratio_95 Kratio_96 Kratio_97 Kratio_98 Kratio_99 Kratio_100 (HNH endonuclease)
Submitted Annotation in DNA Master Format	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	KM923971
Refseq Number	None yet
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	2
Pitt Freezer Box Grid#	B10

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