The Actinobacteriophage Database

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Detailed Information for Phage Larva
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Former names	Mooch
Found By	Ruth Dana & Veronica Gray
Year Found	2010
Location Found	Williamsburg, VA USA
Finding Institution	College of William & Mary
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	Not entered
GPS Coordinates	37.27185 N, 76.7208 W Map
Discovery Notes	Sample Type: Soil/Compost Depth: <1 inch Approximate Temp: 85°F General Location: Found in compost behind the Commons Dining at W&M Elevation: 84 ft.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Jan 26, 2011
Genome length (bp)	62991
Character of genome ends	3' Sticky Overhang
Overhang Length	11 bases
Overhang Sequence	CTCAGTGGCAT
GC Content	65.3%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	K
Subcluster	K5
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View ActinUp (K1) Adephagia (K1) Adonis (K1) Ageofdapage (K1) AlishaPH (K1) Amelie (K1) Anaya (K1) Angelica (K1) Apocalypse (K1) Asayake (K1) Atiba (K1) BaghaKamala (K1) BarrelRoll (K1) BEEST (K1) Beezoo (K1) Bella96 (K1) Belladonna (K1) BGlluviae (K1) Biglebops (K1) Blizzard (K1) Boiiii (K1) Capricorn (K1) CaseJules (K1) CheetoDust (K1) Chris (K1) Clipper (K1) CREW (K1) CrimD (K1) Curiosium (K1) Dalmuri (K1) Dartin (K1) Deby (K1) Devera (K1) Dole (K1) DrHayes (K1) Durfee (K1) Efra2 (K1) Emerson (K1) Enkosi (K1) Ganymede (K1) Geraldini (K1) Guanica15 (K1) HedwigODU (K1) Homura (K1) Hyperbowlee (K1) Illumine (K1) Inky (K1) Jarvi (K1) JAWS (K1) Jayhawk (K1) Jeckyll (K1) Joy99 (K1) KiSi (K1) LastHope (K1) LaterM (K1) LeMond (K1) LilPharaoh (K1) LindNT (K1) Llorens (K1) Lunahalos (K1) MacKat (K1) MarkPhew (K1) McMater (K1) Mdavu (K1) MeaningOfLife (K1) Megsy (K1) Murucutumbu (K1) Mynx (K1) Nibb (K1) Nikao (K1) Niklas (K1) Nutello (K1) Oscar (K1) Padfoot (K1) Padpat (K1) Peanam (K1) Peel (K1) Piatt (K1) Pokerus (K1) Prithvi (K1) QuincyRose (K1) Ramen (K1) Rapunzel97 (K1) Richo (K1) Rosmarinus (K1) SamuelLPlaqson (K1) Scarlett (K1) SgtBeansprout (K1) Shaobing (K1) ShiaSurprise (K1) Slimphazie (K1) Spock (K1) Stinson (K1) Sulley (K1) Tachez (K1) TaiwanKao (K1) TingHuaYa (K1) TiniBug (K1) Tiri (K1) Topper (K1) Torres (K1) TreyKay (K1) TruffulaTree (K1) Twitch (K1) Urkel (K1) Validus (K1) Veliki (K1) YoureAdopted (K1) Yunkel11 (K1) Zabiza (K1) Zavala (K1) BoostSeason (K2) DismalFunk (K2) DismalStressor (K2) Findley (K2) Marcoliusprime (K2) Milly (K2) Mufasa (K2) Strobilo (K2) TM4 (K2) ZoeJ (K2) Hurricane (K3) Keshu (K3) MacnCheese (K3) Pharb (K3) Pixie (K3) ShedlockHolmes (K3) TBond007 (K3) TribleTrouble (K3) Chancellor (K4) Cheetobro (K4) Eponine (K4) Fionnbharth (K4) JF1 (K4) Juliette (K4) Kraw (K4) Malthus (K4) MissDaisy (K4) Mitti (K4) OmniCritical (K4) Patt (K4) Reptar3000 (K4) Ruthiejr (K4) SamScheppers (K4) Slarp (K4) Taquito (K4) Wintermute (K4) Agent47 (K5) AlleyCat (K5) Collard (K5) Dadosky (K5) Edugator (K5) Feyre (K5) Gengar (K5) Guillsminger (K5) Heftyboy (K5) InvictusManeo (K5) Kratio (K5) Larva (K5) Leston (K5) Miryou (K5) OkiRoe (K5) Omnicron (K5) Paola (K5) Psycho (K5) Rando14 (K5) SoSeph (K5) Thyatira (K5) Waterfoul (K5) Amgine (K6) Amohnition (K6) Bryler (K6) Cain (K6) DarthP (K6) Ekdilam (K6) Ellie (K6) Fefferhead (K6) Hammy (K6) Krueger (K6) Marshawn (K6) November (K6) PhelpsODU (K6) Phrank (K6) Shadow1 (K6) SirPhilip (K6) Sunflower1121 (K6) Syra333 (K6) TClif (K6) Tierra (K6) Unicorn (K6) Ximenita (K6) Yuna (K6) Aminay (K7) Boilgate (K8)
Annotating Institution	Unknown or unassigned
Annotation Status	In GenBank
Plaque Notes	Size: 2 mm Appearance: Clear Incubation Time: 24 hours Incubation Temp: 37°C
Morphotype	Siphoviridae
Number of Genes	97
Number of tRNAs	1
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View Larva_1 Larva_2 Larva_3 Larva_4 — tRNA (codon recognized: UGG) Larva_5 Larva_6 (terminase) Larva_7 (portal protein) Larva_8 (MuF-like minor capsid protein) Larva_9 Larva_10 (scaffolding protein) Larva_11 (major capsid protein) Larva_12 (head-to-tail adaptor) Larva_13 (head-to-tail stopper) Larva_14 Larva_15 (tail terminator) Larva_16 (major tail protein) Larva_17 (tail assembly chaperone) Larva_18 (tail assembly chaperone) Larva_19 (tape measure protein) Larva_20 (minor tail protein) Larva_21 (minor tail protein) Larva_22 Larva_23 Larva_24 (minor tail protein) Larva_25 Larva_26 (minor tail protein) Larva_27 Larva_28 Larva_29 Larva_30 (lysin A) Larva_31 (lysin B) Larva_32 (holin) Larva_33 Larva_34 Larva_35 Larva_36 Larva_37 Larva_38 Larva_39 (serine integrase) Larva_40 Larva_41 Larva_42 Larva_43 Larva_44 Larva_45 Larva_46 Larva_47 Larva_48 (DNA polymerase III sliding clamp) Larva_49 Larva_50 Larva_51 Larva_52 Larva_53 Larva_54 Larva_55 Larva_56 Larva_57 Larva_58 Larva_59 Larva_60 Larva_61 (NrdH-like glutaredoxin) Larva_62 Larva_63 Larva_64 Larva_65 (DNA helicase) Larva_66 (holliday junction resolvase) Larva_67 Larva_68 Larva_69 Larva_70 Larva_71 Larva_72 Larva_73 Larva_74 Larva_75 Larva_76 Larva_77 (RtcB-like RNA ligase) Larva_78 Larva_79 Larva_80 Larva_81 Larva_82 Larva_83 Larva_84 Larva_85 Larva_86 (queuine tRNA-ribosyltransferase) Larva_87 Larva_88 Larva_89 Larva_90 Larva_91 Larva_92 Larva_93 Larva_94 Larva_95 Larva_96 Larva_97 Larva_98 (HNH endonuclease)
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	JN243855
Refseq Number	NC_023724
Published in Paper	Pope, Bowman, Russell, et al 2015, eLIFE: Whole genome comparison of a large collection of mycobacteriophages reveals a continuum of phage genetic diversity
Archiving Info
Archiving status	Archived
SEA Designator	2010CWAMlarvaVCG
Pitt Freezer Box#	2
Pitt Freezer Box Grid#	C2
Available Files
Plaque Picture	Download
Final DNAMaster File	Download

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