Detailed Information for Phage Megsy |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Megan Youngs and Annah Van Deventer |
Year Found | 2023 |
Location Found | Orono, ME USA |
Finding Institution | University of Maine, Honors College |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 30°C |
GPS Coordinates | 44.8966 N, 68.65925 W Map |
Discovery Notes | Wooden garden bin, collected around 1" in depth |
Naming Notes | My friend calls me this |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 16, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 177 |
Genome length (bp) | 60191 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGTAGGCAT |
GC Content | 66.8% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
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Annotating Institution | University of Maine, Honors College |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 101 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | PP978876 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
186 |
Pitt Freezer Box Grid# |
F10 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |