The Actinobacteriophage Database

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Detailed Information for Phage QuincyRose
Discovery Information
Isolation Host	Mycobacterium smegmatis mc²155
Former names	Quincy (but misspelled "Qunicy"
Found By	Alexandra Vroom
Year Found	2015
Location Found	Holland, MI USA
Finding Institution	Hope College
Program	Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?	Yes
Isolation Temperature	32°C
GPS Coordinates	42.78822 N, 86.100227 W Map
Discovery Notes	I found this by a manhole near a cafeteria dumpster.
Naming Notes	I named it QuincyRose because I was wanted the name to have a Q in it.
Sequencing Information
Sequencing Complete?	Yes
Date Sequencing Completed	Aug 9, 2019
Sequencing Facility	Hope College
Shotgun Sequencing Method	Illumina
Approximate Shotgun Coverage	1930
Genome length (bp)	59719
Character of genome ends	3' Sticky Overhang
Overhang Length	11 bases
Overhang Sequence	CTCGTAGGCAT
GC Content	66.5%
Fasta file available?	Yes: Download fasta file
Characterization
Cluster	K
Subcluster	K1
Cluster Life Cycle	Temperate
Other Cluster Members	Click to View ActinUp (K1) Adephagia (K1) Adonis (K1) Ageofdapage (K1) AlishaPH (K1) Amelie (K1) Anaya (K1) Angelica (K1) Apocalypse (K1) Asayake (K1) Atiba (K1) BaghaKamala (K1) BarrelRoll (K1) BEEST (K1) Beezoo (K1) Bella96 (K1) Belladonna (K1) BGlluviae (K1) Biglebops (K1) Blizzard (K1) Boiiii (K1) Capricorn (K1) CaseJules (K1) CheetoDust (K1) Chris (K1) Clipper (K1) CREW (K1) CrimD (K1) Curiosium (K1) Dalmuri (K1) Dartin (K1) Deby (K1) Devera (K1) Dole (K1) DrHayes (K1) Durfee (K1) Efra2 (K1) Emerson (K1) Enkosi (K1) Ganymede (K1) Geraldini (K1) Guanica15 (K1) HedwigODU (K1) Homura (K1) Hyperbowlee (K1) Illumine (K1) Inky (K1) Jarvi (K1) JAWS (K1) Jayhawk (K1) Jeckyll (K1) Joy99 (K1) KiSi (K1) LastHope (K1) LaterM (K1) LeMond (K1) LilPharaoh (K1) LindNT (K1) Llorens (K1) Lunahalos (K1) MacKat (K1) MarkPhew (K1) McMater (K1) Mdavu (K1) MeaningOfLife (K1) Megsy (K1) Murucutumbu (K1) Mynx (K1) Nibb (K1) Nikao (K1) Niklas (K1) Nutello (K1) Oscar (K1) Padfoot (K1) Padpat (K1) Peanam (K1) Peel (K1) Piatt (K1) Pokerus (K1) Prithvi (K1) QuincyRose (K1) Ramen (K1) Rapunzel97 (K1) Richo (K1) Rosmarinus (K1) SamuelLPlaqson (K1) Scarlett (K1) SgtBeansprout (K1) Shaobing (K1) ShiaSurprise (K1) Slimphazie (K1) Spock (K1) Stinson (K1) Sulley (K1) Tachez (K1) TaiwanKao (K1) TingHuaYa (K1) TiniBug (K1) Tiri (K1) Topper (K1) Torres (K1) TreyKay (K1) TruffulaTree (K1) Twitch (K1) Urkel (K1) Validus (K1) Veliki (K1) YoureAdopted (K1) Yunkel11 (K1) Zabiza (K1) Zavala (K1) BoostSeason (K2) DismalFunk (K2) DismalStressor (K2) Findley (K2) Marcoliusprime (K2) Milly (K2) Mufasa (K2) Strobilo (K2) TM4 (K2) ZoeJ (K2) Hurricane (K3) Keshu (K3) MacnCheese (K3) Pharb (K3) Pixie (K3) ShedlockHolmes (K3) TBond007 (K3) TribleTrouble (K3) Chancellor (K4) Cheetobro (K4) Eponine (K4) Fionnbharth (K4) JF1 (K4) Juliette (K4) Kraw (K4) Malthus (K4) MissDaisy (K4) Mitti (K4) OmniCritical (K4) Patt (K4) Reptar3000 (K4) Ruthiejr (K4) SamScheppers (K4) Slarp (K4) Taquito (K4) Wintermute (K4) Agent47 (K5) AlleyCat (K5) Collard (K5) Dadosky (K5) Edugator (K5) Feyre (K5) Gengar (K5) Guillsminger (K5) Heftyboy (K5) InvictusManeo (K5) Kratio (K5) Larva (K5) Leston (K5) Miryou (K5) OkiRoe (K5) Omnicron (K5) Paola (K5) Psycho (K5) Rando14 (K5) SoSeph (K5) Thyatira (K5) Waterfoul (K5) Amgine (K6) Amohnition (K6) Bryler (K6) Cain (K6) DarthP (K6) Ekdilam (K6) Ellie (K6) Fefferhead (K6) Hammy (K6) Krueger (K6) Marshawn (K6) November (K6) PhelpsODU (K6) Phrank (K6) Shadow1 (K6) SirPhilip (K6) Sunflower1121 (K6) Syra333 (K6) TClif (K6) Tierra (K6) Unicorn (K6) Ximenita (K6) Yuna (K6) Aminay (K7) Boilgate (K8)
Annotating Institution	University of Maine, Farmington
Annotation Status	In GenBank
Plaque Notes	The diameter of my plaque ranges from 2 mm to almost 4 mm, depending on how long it incubates and how high the concentration of plaques is. The longer it grows, the larger the plaque. For example, after incubating 48 hours, the average plaque size of 20 plaques was 3.7 mm. Also, the higher the concentration of plaques, the smaller the diameter. The plaque is circular and clear.
Morphotype	Siphoviridae
Number of Genes	94
Number of tRNAs	0
Number of tmRNAs	0
Has been Phamerated?	Yes
Gene List	Click to View QuincyRose_1 QuincyRose_2 QuincyRose_3 QuincyRose_4 QuincyRose_5 QuincyRose_6 QuincyRose_7 (terminase) QuincyRose_8 (portal protein) QuincyRose_9 (MuF-like minor capsid protein) QuincyRose_10 QuincyRose_11 (scaffolding protein) QuincyRose_12 (major capsid protein) QuincyRose_13 (head-to-tail adaptor) QuincyRose_14 (head-to-tail stopper) QuincyRose_15 QuincyRose_16 (tail terminator) QuincyRose_17 (major tail protein) QuincyRose_18 (tail assembly chaperone) QuincyRose_19 (tail assembly chaperone) QuincyRose_20 (tape measure protein) QuincyRose_21 (minor tail protein) QuincyRose_22 (minor tail protein) QuincyRose_23 QuincyRose_24 (minor tail protein) QuincyRose_25 QuincyRose_26 (minor tail protein) QuincyRose_27 (minor tail protein) QuincyRose_28 QuincyRose_29 (lysin A) QuincyRose_30 (lysin B) QuincyRose_31 (holin) QuincyRose_32 QuincyRose_33 QuincyRose_34 (MRE11 double-strand break endo/exonuclease) QuincyRose_35 QuincyRose_36 QuincyRose_37 QuincyRose_38 QuincyRose_39 QuincyRose_40 (tyrosine integrase) QuincyRose_41 QuincyRose_42 (immunity repressor) QuincyRose_43 (helix-turn-helix DNA binding domain protein) QuincyRose_44 (excise) QuincyRose_45 QuincyRose_46 QuincyRose_47 QuincyRose_48 (MerR-like helix-turn-helix DNA binding domain protein) QuincyRose_49 (WhiB family transcription factor) QuincyRose_50 QuincyRose_51 QuincyRose_52 QuincyRose_53 QuincyRose_54 QuincyRose_55 QuincyRose_56 (DnaE-like DNA polymerase III) QuincyRose_57 QuincyRose_58 QuincyRose_59 QuincyRose_60 (Cas4 family exonuclease) QuincyRose_61 QuincyRose_62 QuincyRose_63 QuincyRose_64 (NrdH-like glutaredoxin) QuincyRose_65 QuincyRose_66 (HNH endonuclease) QuincyRose_67 (DNA primase/helicase) QuincyRose_68 (RusA-like resolvase) QuincyRose_69 QuincyRose_70 QuincyRose_71 QuincyRose_72 QuincyRose_73 QuincyRose_74 QuincyRose_75 QuincyRose_76 QuincyRose_77 QuincyRose_78 QuincyRose_79 QuincyRose_80 QuincyRose_81 QuincyRose_82 QuincyRose_83 (RtcB-like RNA ligase) QuincyRose_84 QuincyRose_85 QuincyRose_86 QuincyRose_87 QuincyRose_88 QuincyRose_89 (HicB-like antitoxin) QuincyRose_90 (HicA-like toxin) QuincyRose_91 QuincyRose_92 QuincyRose_93 QuincyRose_94 (HNH endonuclease)
Submitted Annotation in DNA Master Format	Download
Submitted Minimal DNA Master File	Download
Author List	Download
Annotation Cover Sheet	Download
Publication Info
Uploaded to GenBank?	Yes
GenBank Accession	MZ648037
Refseq Number	None yet
Archiving Info
Archiving status	Archived
Pitt Freezer Box#	19
Pitt Freezer Box Grid#	E6
Available Files
Plaque Picture	Download
GenBank File for Phamerator	Download

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