Detailed Information for Phage Rando14 |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Renee' Miller |
Year Found | 2014 |
Location Found | New Orleans , LA USA |
Finding Institution | Xavier University of Louisiana |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Unknown |
Isolation Temperature | Not entered |
GPS Coordinates | 29.963564 N, 90.106258 W Map |
Discovery Notes | Found 1-2 inches in submerged soil. |
Naming Notes | Previously thought to have random ("Rando") plaque morphology. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Dec 14, 2017 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 2179 |
Genome length (bp) | 59925 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CTCGTGGCAT |
GC Content | 64.3% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K5 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Western Carolina University |
Annotation Status | In GenBank |
Plaque Notes | Large plaques which are turbid with clear centers. |
Morphotype | Siphoviridae |
Number of Genes | 91 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MH697592 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
8.1X10^8pfu/ml |
Pitt Freezer Box# |
11 |
Pitt Freezer Box Grid# |
H5 |
Available Files |
Plaque Picture | Download |
GenBank File for Phamerator | Download |