Mycobacterium phage Torres
Torres Plaque Picture
Torres EM Picture
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Detailed Information for Phage Torres
Discovery Information
Isolation HostMycobacterium smegmatis mc²155
Found ByMarta Pozuelo Torres
Year Found2024
Location FoundCape Town, South Africa
Finding InstitutionTASK South Africa
ProgramScience Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science
From enriched soil sample?Yes
Isolation Temperature37°C
GPS Coordinates33.950512 S, 18.481892 E Map
Discovery NotesThe environmental sample came from soil and was sampled 24 hours before it was enriched
Sequencing Information
Sequencing Complete?Yes
Date Sequencing CompletedJul 24, 2024
Sequencing FacilityPittsburgh Bacteriophage Institute
Shotgun Sequencing MethodIllumina
Sequencer UsedIllumina NextSeq 1000
Read TypeSingle-end reads
Read Length100 bp
Approximate Shotgun Coverage4569
Genome length (bp)59053
Character of genome ends3' Sticky Overhang
Overhang Length11 bases
Overhang SequenceCTCGGGGGCAT
GC Content67.2%
Sequencing Notesat position 21641 bp 40% of reads contain an A instead of a G
Fasta file available?Yes: Download fasta file
Characterization
ClusterK
SubclusterK1
Cluster Life CycleTemperate
Lysogeny NotesCould be temperate
Other Cluster Members

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ActinUp (K1)

Adephagia (K1)

Adonis (K1)

Ageofdapage (K1)

AlishaPH (K1)

Amelie (K1)

Anaya (K1)

Angelica (K1)

Apocalypse (K1)

Asayake (K1)

Atiba (K1)

BaghaKamala (K1)

BarrelRoll (K1)

BEEST (K1)

Beezoo (K1)

Bella96 (K1)

Belladonna (K1)

Bern (K1)

BGlluviae (K1)

Biglebops (K1)

Blizzard (K1)

Boiiii (K1)

CallaLilly (K1)

Capricorn (K1)

CaseJules (K1)

Chavito (K1)

CheetoDust (K1)

Chris (K1)

Clipper (K1)

CREW (K1)

CrimD (K1)

Curiosium (K1)

Dalmuri (K1)

Dartin (K1)

Deby (K1)

Devera (K1)

Dole (K1)

DrHayes (K1)

Durfee (K1)

Efra2 (K1)

Emerson (K1)

Enkosi (K1)

Ganymede (K1)

Geraldini (K1)

Guanica15 (K1)

HedwigODU (K1)

Homura (K1)

Hyperbowlee (K1)

Illumine (K1)

Inky (K1)

Jarvi (K1)

JAWS (K1)

Jayhawk (K1)

Jeckyll (K1)

Joy99 (K1)

KiSi (K1)

LastHope (K1)

LaterM (K1)

LeMond (K1)

LilPharaoh (K1)

LindNT (K1)

Llorens (K1)

Lunahalos (K1)

MacKat (K1)

MarkPhew (K1)

McMater (K1)

Mdavu (K1)

MeaningOfLife (K1)

Megsy (K1)

Murucutumbu (K1)

Mynx (K1)

Nibb (K1)

Nikao (K1)

Niklas (K1)

Nutello (K1)

Oscar (K1)

Padfoot (K1)

Padpat (K1)

Peanam (K1)

Peel (K1)

Piatt (K1)

Pisa4 (K1)

Pokerus (K1)

Prithvi (K1)

QuincyRose (K1)

Ramen (K1)

Rapunzel97 (K1)

Richo (K1)

Rosmarinus (K1)

SamuelLPlaqson (K1)

Scarlett (K1)

SgtBeansprout (K1)

Shaobing (K1)

ShiaSurprise (K1)

Slimphazie (K1)

Spock (K1)

Stinson (K1)

Sulley (K1)

Tachez (K1)

TaiwanKao (K1)

Teejan (K1)

TingHuaYa (K1)

TiniBug (K1)

Tiri (K1)

Topper (K1)

Torres (K1)

TreyKay (K1)

Trice (K1)

TruffulaTree (K1)

Twitch (K1)

Urkel (K1)

Validus (K1)

Veliki (K1)

YoureAdopted (K1)

Yunkel11 (K1)

Zabiza (K1)

Zavala (K1)

BoostSeason (K2)

DismalFunk (K2)

DismalStressor (K2)

Doughnut (K2)

Findley (K2)

Marcoliusprime (K2)

Milly (K2)

Mufasa (K2)

Strobilo (K2)

TM4 (K2)

ZoeJ (K2)

Hurricane (K3)

Keshu (K3)

Lea83 (K3)

MacnCheese (K3)

Neighly (K3)

Pharb (K3)

Pixie (K3)

ShedlockHolmes (K3)

TBond007 (K3)

TribleTrouble (K3)

Bobquesha (K4)

Chancellor (K4)

Cheetobro (K4)

DanSyl44 (K4)

Eponine (K4)

Fionnbharth (K4)

JF1 (K4)

Juliette (K4)

Kraw (K4)

Lebo14 (K4)

Malthus (K4)

MissDaisy (K4)

Mitti (K4)

OmniCritical (K4)

Patt (K4)

Reptar3000 (K4)

Ruthiejr (K4)

SamScheppers (K4)

Slarp (K4)

Taquito (K4)

Wintermute (K4)

YasnayaPolyana (K4)

Agent47 (K5)

AlleyCat (K5)

Collard (K5)

Dadosky (K5)

Edugator (K5)

Feyre (K5)

Gengar (K5)

Guillsminger (K5)

Heftyboy (K5)

InvictusManeo (K5)

Kratio (K5)

Larva (K5)

Leston (K5)

Miryou (K5)

OkiRoe (K5)

Omnicron (K5)

Paola (K5)

Psycho (K5)

Rando14 (K5)

SoSeph (K5)

Thyatira (K5)

ViviJ (K5)

Waterfoul (K5)

Amgine (K6)

Amohnition (K6)

Applecrisp (K6)

Bryler (K6)

Cain (K6)

DarthP (K6)

Ekdilam (K6)

Ellie (K6)

Fefferhead (K6)

Hammy (K6)

Krueger (K6)

Marshawn (K6)

November (K6)

PhelpsODU (K6)

Phrank (K6)

Shadow1 (K6)

SirPhilip (K6)

Sunflower1121 (K6)

Syra333 (K6)

TClif (K6)

Tierra (K6)

Unicorn (K6)

Ximenita (K6)

Yuna (K6)

Aminay (K7)

Boilgate (K8)

Annotating InstitutionTASK South Africa
Annotation StatusQC Complete
Plaque NotesPlaques appear turbid
MorphotypeSiphoviridae
Number of Genes80
Number of tRNAs0
Number of tmRNAs0
Has been Phamerated?Yes
Gene List

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Torres_1

Torres_2

Torres_3
(terminase, small subunit)

Torres_4
(terminase, large subunit)

Torres_5
(portal protein)

Torres_6
(capsid maturation protease)

Torres_7

Torres_8
(scaffolding protein)

Torres_9
(major capsid protein)

Torres_10
(head-to-tail adaptor)

Torres_11
(head-to-tail stopper)

Torres_12

Torres_13
(tail terminator)

Torres_14
(tail tube protein)

Torres_15
(tail assembly chaperone)

Torres_16
(tail assembly chaperone)

Torres_17
(tape measure protein)

Torres_18
(Dit)

Torres_19
(baseplate hub)

Torres_20

Torres_21
(minor tail protein)

Torres_22
(minor tail protein)

Torres_23
(tail spike)

Torres_24
(minor tail protein)

Torres_25

Torres_26
(lysin A)

Torres_27
(lysin B)

Torres_28
(holin)

Torres_29
(transmembrane protein)

Torres_30

Torres_31
(exonuclease)

Torres_32

Torres_33

Torres_34

Torres_35
(queuine tRNA-ribosyltransferase)

Torres_36
(transposase)

Torres_37
(transporter-like protein)

Torres_38

Torres_39
(tyrosine integrase)

Torres_40

Torres_41
(immunity repressor)

Torres_42
(Cro (control of repressor's operator))

Torres_43
(excise)

Torres_44

Torres_45

Torres_46
(transmembrane domain)

Torres_47

Torres_48
(helix-turn-helix DNA binding protein)

Torres_49
(helix-turn-helix DNA binding domain)

Torres_50
(WhiB family transcription factor)

Torres_51

Torres_52
(DnaQ-like (DNA polymerase III subunit))

Torres_53
(Cas4 family exonuclease)

Torres_54

Torres_55

Torres_56

Torres_57

Torres_58
(NrdH-like glutaredoxin)

Torres_59
(HNH endonuclease)

Torres_60
(DNA primase/helicase)

Torres_61
(RusA-like resolvase)

Torres_62

Torres_63
(DNA binding protein)

Torres_64

Torres_65

Torres_66

Torres_67

Torres_68
(transmembrane domains)

Torres_69
(polynucleotide kinase)

Torres_70
(RtcB-like RNA ligase)

Torres_71
(rtcB-like RNA ligase)

Torres_72

Torres_73

Torres_74

Torres_75
(antitoxin in toxin/antitoxin system, HicB-like)

Torres_76
(toxin in toxin/antitoxin system, HicA-like)

Torres_77

Torres_78
(DNA binding protein)

Torres_79

Torres_80
(HNH endonuclease)

Submitted Minimal DNA Master FileDownload
Publication Info
Uploaded to GenBank?No
GenBank AccessionNone yet
Refseq NumberNone yet
Archiving Info
Archiving status Not in Pitt Archives
Available Files
GenBank File for PhameratorDownload