Detailed Information for Phage Torres |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Marta Pozuelo Torres |
Year Found | 2024 |
Location Found | Cape Town, South Africa |
Finding Institution | TASK South Africa |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 33.950512 S, 18.481892 E Map |
Discovery Notes | The environmental sample came from soil and was sampled 24 hours before it was enriched |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jul 24, 2024 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina Sequencing |
Approximate Shotgun Coverage | 4569 |
Genome length (bp) | 59053 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGGGGGCAT |
GC Content | 67.2% |
Sequencing Notes | at position 21641 bp 40% of reads contain an A instead of a G |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K1 |
Cluster Life Cycle | Temperate |
Lysogeny Notes | Could be temperate |
Other Cluster Members |
|
Annotating Institution | TASK South Africa |
Annotation Status | Being Annotated (Expected completion by 1/24/2025) |
Plaque Notes | Plaques appear turbid |
Morphotype | Siphoviridae |
Number of Genes | 79 |
Number of tRNAs | 0 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Publication Info |
Uploaded to GenBank? | No |
GenBank Accession | None yet |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Not in Pitt Archives |