Detailed Information for Phage Yuna |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Tia Ny Riana RABEMANANTSOA |
Year Found | 2018 |
Location Found | Ranomafana, Madagascar |
Finding Institution | University of Pittsburgh |
Program | Phage Hunters Integrating Research and Education |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 21.253333 S, 47.0 E Map |
Discovery Notes | Isolation and amplification at 22C (room temperature). |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Aug 16, 2018 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 4014 |
Genome length (bp) | 62192 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 10 bases |
Overhang Sequence | CTCGGGGCAT |
GC Content | 67.4% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K6 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | University of Pittsburgh |
Annotation Status | In GenBank |
Morphotype | Siphoviridae |
Number of Genes | 99 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MN234176 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
8 |
Pitt Freezer Box Grid# |
C8 |
Available Files |
Plaque Picture | Download |
EM Picture | Download |
Final DNAMaster File | Download |
GenBank File for Phamerator | Download |