Detailed Information for Phage Ageofdapage |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Vishnu Marella |
Year Found | 2021 |
Location Found | Richmond, VA United States |
Finding Institution | Virginia Commonwealth University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 37°C |
GPS Coordinates | 37.545273 N, 77.454804 W Map |
Discovery Notes | Ahmed and todd collected the sample |
Naming Notes | The name came from a catchphrase used in the class |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Feb 20, 2023 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 1284 |
Genome length (bp) | 60613 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGTAGGCAT |
GC Content | 66.5% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Virginia Commonwealth University |
Annotation Status | In GenBank |
Plaque Notes | it's a clear and round plaque with a diameter of .3cm |
Morphotype | Siphoviridae |
Number of Genes | 99 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Annotation in DNA Master Format | Download |
Submitted Minimal DNA Master File | Download |
Author List | Download |
Annotation Cover Sheet | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | OR521076 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
Pitt Freezer Box# |
145 |
Pitt Freezer Box Grid# |
D12 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
Virtual Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |