| Detailed Information for Phage AlishaPH |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | Emma Livernois and Robin Austin |
| Year Found | 2015 |
| Location Found | Northampton, MA USA |
| Finding Institution | Smith College |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 42.316300 N, 72.640300 W Map |
| Discovery Notes | Isolated from moist soil, 1-3 cm deep underneath deciduous trees near a field, in september. |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Mar 4, 2016 |
| Sequencing Facility | Smith College |
| Shotgun Sequencing Method | Illumina Sequencing |
| Approximate Shotgun Coverage | 662 |
| Genome length (bp) | 57034 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CTCGTAGGCAT |
| GC Content | 66.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | K |
| Subcluster | K1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | Smith College |
| Annotation Status | In GenBank |
| Plaque Notes | Very clear plaques |
| Morphotype | Siphoviridae |
| Number of Genes | 88 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Annotation in DNA Master Format | Download |
| Submitted Minimal DNA Master File | Download |
| Author List | Download |
| Annotation Cover Sheet | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MH077577 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Archived |
| Pitt Freezer Box# |
23 |
| Pitt Freezer Box Grid# |
E12 |
| Available Files |
| EM Picture | Download |
| GenBank File for Phamerator | Download |
