| Detailed Information for Phage Guanica15 |
| Discovery Information |
| Isolation Host | Mycobacterium smegmatis mc²155 |
| Found By | José Efraín Berríos-López |
| Year Found | 2013 |
| Location Found | Guanica, PR |
| Finding Institution | University of Puerto Rico at Cayey |
| Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
| From enriched soil sample? | Yes |
| Isolation Temperature | Not entered |
| GPS Coordinates | 17.967033 N, 66.821481 W Map |
| Discovery Notes | April 14, 2013
2:00pm
Collected in a sunny day.
Soil moisture: 20%
Soil pH: 7.0
Soil temperature:34.9°C |
| Naming Notes | Found in Guanica Dry Forest |
| Sequencing Information |
| Sequencing Complete? | Yes |
| Date Sequencing Completed | Jun 30, 2015 |
| Sequencing Facility | NC State Genomic Sciences Laboratory |
| Shotgun Sequencing Method | Illumina |
| Sequencer Used | Illumina MiSeq |
| Read Type | Single-end reads |
| Read Length | 150 bp |
| Approximate Shotgun Coverage | 2208 |
| Genome length (bp) | 60974 |
| Character of genome ends | 3' Sticky Overhang |
| Overhang Length | 11 bases |
| Overhang Sequence | CTCGTAGGCAT |
| GC Content | 66.6% |
| Fasta file available? | Yes: Download fasta file |
| Characterization |
| Cluster | K |
| Subcluster | K1 |
| Cluster Life Cycle | Temperate |
| Other Cluster Members |
|
| Annotating Institution | University of Pittsburgh |
| Annotation Status | In GenBank |
| Plaque Notes | Lytic plaque |
| Morphotype | Siphoviridae |
| Number of Genes | 102 |
| Number of tRNAs | 1 |
| Number of tmRNAs | 0 |
| Has been Phamerated? | Yes |
| Gene List |
|
| Submitted Minimal DNA Master File | Download |
| Publication Info |
| Uploaded to GenBank? | Yes |
| GenBank Accession | MN234201 |
| Refseq Number | None yet |
| Archiving Info |
| Archiving status |
Not in Pitt Archives |
| Available Files |
| Final DNAMaster File | Download |
| GenBank File for Phamerator | Download |