Detailed Information for Phage KiSi |
Discovery Information |
Isolation Host | Mycobacterium smegmatis mc²155 |
Found By | Monica Kinder & Elisabeth Sitio |
Year Found | 2014 |
Location Found | Spokane, WA USA |
Finding Institution | Gonzaga University |
Program | Science Education Alliance-Phage Hunters Advancing Genomics and Evolutionary Science |
From enriched soil sample? | Yes |
Isolation Temperature | 22°C |
GPS Coordinates | 47.667074 N, 117.402995 W Map |
Discovery Notes | Soil sample was collected from a puddle near the front of Hughes building at Gonzaga University in Spokane Washington. |
Naming Notes | My lab partner and I combined the first two letters of our last names to make the name of our phage. |
Sequencing Information |
Sequencing Complete? | Yes |
Date Sequencing Completed | Jan 23, 2015 |
Sequencing Facility | Pittsburgh Bacteriophage Institute |
Shotgun Sequencing Method | Illumina |
Approximate Shotgun Coverage | 333 |
Genome length (bp) | 62558 |
Character of genome ends | 3' Sticky Overhang |
Overhang Length | 11 bases |
Overhang Sequence | CTCGTAGGCAT |
GC Content | 68.7% |
Fasta file available? | Yes: Download fasta file |
Characterization |
Cluster | K |
Subcluster | K1 |
Cluster Life Cycle | Temperate |
Other Cluster Members |
|
Annotating Institution | Gonzaga University |
Annotation Status | In GenBank |
Plaque Notes | The plaques were 3mm in diameter and cloudy. |
Morphotype | Siphoviridae |
Number of Genes | 103 |
Number of tRNAs | 1 |
Number of tmRNAs | 0 |
Has been Phamerated? | Yes |
Gene List |
|
Submitted Minimal DNA Master File | Download |
Publication Info |
Uploaded to GenBank? | Yes |
GenBank Accession | MK376955 |
Refseq Number | None yet |
Archiving Info |
Archiving status |
Archived |
SEA Lysate Titer |
1.15x10^10 pfu/mL |
Pitt Freezer Box# |
16 |
Pitt Freezer Box Grid# |
G3 |
Available Files |
Plaque Picture | Download |
Restriction Digest Picture | Download |
EM Picture | Download |
GenBank File for Phamerator | Download |